RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 NME8Q8N427 588 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 HTR3CQ8WXA8 447 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 CENPIQ92674 756 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 TINF2Q9BSI4 451 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 TIMM13Q9Y5L4 95 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FAM72CH0Y354 149 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FCHO1O14526 889 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 ATP5HO75947 161 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 TSHRP16473 764 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 MGAT1P26572 445 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 PSMB4P28070 264 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 PTPN9P43378 593 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 BEX3Q00994 111 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 RCN2Q14257 317 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 KHDC1Q4VXA5 237 aaKnown RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FAM72AQ5TYM5 149 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 TRIM68Q6AZZ1 485 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FAM72DQ6L9T8 149 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FAM72BQ86X60 149 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 TREML1Q86YW5 311 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 APPL2Q8NEU8 664 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 EBF4Q9BQW3 602 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FAM167BQ9BTA0 163 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 SNX25Q9H3E2 840 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 RNPEPL1Q9HAU8 725 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 ANLNQ9NQW6 1124 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCTN3-201ENST00000265993 USP3Q9Y6I4 520 aa11.22□□□□□ -0.61
TCTN3-201ENST00000265993 I6L893 689 aaPredicted RBP11.21□□□□□ -0.61
TCTN3-201ENST00000265993 RNF103O00237 685 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 PIRO00625 290 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 GCATO75600 419 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 TPBGLP0DKB5 382 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 KCNA4P22459 653 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 ARHGAP17Q68EM7 881 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 NUDCD3Q8IVD9 361 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 LRRC52Q8N7C0 313 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 TFB1MQ8WVM0 346 aaKnown RBP11.21□□□□□ -0.61
TCTN3-201ENST00000265993 E2F7Q96AV8 911 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 PTCD3Q96EY7 689 aaKnown RBP11.21□□□□□ -0.61
TCTN3-201ENST00000265993 P2RY11Q96G91 374 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.611e-7■■■□□ 16.7
TCTN3-201ENST00000265993 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
TCTN3-201ENST00000265993 FAM159BA6NKW6 160 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 M0QYT0 321 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 GYG2O15488 501 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 KRT38O76015 456 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.62
TCTN3-201ENST00000265993 ENO1P06733 434 aaKnown RBP11.21□□□□□ -0.62
TCTN3-201ENST00000265993 SETSIPP0DME0 302 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 DESP17661 470 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 ARL4AP40617 200 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 MLH1P40692 756 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 MAGEA6P43360 314 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 PGGT1BP53609 377 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 AQP5P55064 265 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 RPL10AP62906 217 aaKnown RBP11.21□□□□□ -0.62
TCTN3-201ENST00000265993 SNX17Q15036 470 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 PPM1JQ5JR12 505 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 ATG14Q6ZNE5 492 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 UNC93AQ86WB7 457 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 TTC39CQ8N584 583 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 B3GALNT2Q8NCR0 500 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 WDR60Q8WVS4 1066 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.62
TCTN3-201ENST00000265993 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 YY1AP1Q9H869 796 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 PIGVQ9NUD9 493 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 TMEM30AQ9NV96 361 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 ZNF358Q9NW07 568 aa11.21□□□□□ -0.62
TCTN3-201ENST00000265993 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.62
TCTN3-201ENST00000265993 CCDC78A2IDD5 438 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 H3BRJ5 948 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
TCTN3-201ENST00000265993 ERVK-10P10266 1014 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 CALB2P22676 271 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 MATKP42679 507 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 RASSF2P50749 326 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 LILRA4P59901 499 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 KDSRQ06136 332 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 WSCD1Q658N2 575 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 MCUQ8NE86 351 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 SHKBP1Q8TBC3 707 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 ZNF398Q8TD17 642 aa11.2□□□□□ -0.62
TCTN3-201ENST00000265993 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms