RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CNGB3Q9NQW8 809 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 OLA1Q9NTK5 396 aaKnown RBP10.17□□□□□ -0.78
VPS41-201ENST00000265745 TMEM74BQ9NUR3 256 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 CACNA2D2Q9NY47 1150 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 EVLQ9UI08 416 aaPredicted RBP10.17□□□□□ -0.78
VPS41-201ENST00000265745 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 PCDHB4Q9Y5E5 795 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 ATG2BQ96BY7 2078 aa10.17□□□□□ -0.78
VPS41-201ENST00000265745 ACACBO00763 2458 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 NPC1O15118 1278 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 ZNF217O75362 1048 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 KCNK5O95279 499 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 GNA14O95837 355 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 CYBBP04839 570 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 LCP1P13796 627 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 HARS2P49590 506 aaKnown RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 MARSP56192 900 aaKnown RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 DAOAP59103 153 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 GCNT1Q02742 428 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 VAC14Q08AM6 782 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 KCNH2Q12809 1159 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 ENPP2Q13822 863 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 N4BP2L1Q5TBK1 243 aaPredicted RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 PMF1Q6P1K2 205 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 SLC36A4Q6YBV0 504 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 ARMCX6Q7L4S7 300 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 RRAGAQ7L523 313 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 PPM1KQ8N3J5 372 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 RBBP8NLQ8NC74 664 aaPredicted RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 DDI1Q8WTU0 396 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 ERLEC1Q96DZ1 483 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 MRGPRX1Q96LB2 322 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 SRRTQ9BXP5 876 aaKnown RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 SLC2A11Q9BYW1 496 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 ABCC13Q9NSE7 274 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 THAP10Q9P2Z0 257 aaPredicted RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 SFMBT1Q9UHJ3 866 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 STOML2Q9UJZ1 356 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 PILRBQ9UKJ0 227 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS41-201ENST00000265745 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
VPS41-201ENST00000265745 RAD54BQ9Y620 910 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 STON1Q9Y6Q2 735 aa10.16□□□□□ -0.78
VPS41-201ENST00000265745 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 IGHV1OR15-9A0A0B4J2B8 117 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 AP5Z1O43299 807 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 TIMM44O43615 452 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 CALCAP01258 141 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 ITPKAP23677 461 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 BRD2P25440 801 aaKnown RBP10.15□□□□□ -0.78
VPS41-201ENST00000265745 HOXD12P35452 270 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 RGS7P49802 495 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 ZNF132P52740 706 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 STX17P56962 302 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 RPL6Q02878 288 aaKnown RBP10.15□□□□□ -0.78
VPS41-201ENST00000265745 PAK1Q13153 545 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 STILQ15468 1287 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 TRIM61Q5EBN2 209 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 ADGRF1Q5T601 910 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 PEAR1Q5VY43 1037 aaPredicted RBP10.15□□□□□ -0.78
VPS41-201ENST00000265745 LYSMD4Q5XG99 296 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 TMEM215Q68D42 235 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 MSANTD2Q6P1R3 559 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 ARHGEF19Q8IW93 802 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 DEFB119Q8N690 84 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 IRGQQ8WZA9 623 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 TMA16Q96EY4 203 aaKnown RBP10.15□□□□□ -0.78
VPS41-201ENST00000265745 HSFY1Q96LI6 401 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 KREMEN1Q96MU8 473 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 SLC6A17Q9H1V8 727 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 TMEM9BQ9NQ34 198 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 ELOVL2Q9NXB9 296 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 CTNND2Q9UQB3 1225 aa10.15□□□□□ -0.78
VPS41-201ENST00000265745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS41-201ENST00000265745 ABCA7Q8IZY2 2146 aa10.15□□□□□ -0.79
VPS41-201ENST00000265745 ZNF638Q14966 1978 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 M0QYV0 167 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 PIK3R2O00459 728 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 MSI1O43347 362 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 LATS1O95835 1130 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 IGLV3-27P01718 113 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 AFPP02771 609 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 HOXD9P28356 352 aaPredicted RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 PMLP29590 882 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 HLA-FP30511 346 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 DPP6P42658 865 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 IL12RB1P42701 662 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 GPD2P43304 727 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 RPL34P49207 117 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 ZNF445P59923 1031 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 ZNF33AQ06730 810 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 LMAN2Q12907 356 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 EIF4HQ15056 248 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 FUT11Q495W5 492 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms