RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 C1orf228Q6PIY5 440 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 ZNF852Q6ZMS4 543 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGCE-201ENST00000265735 STK32AQ8WU08 396 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 HES6Q96HZ4 224 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 PNKPQ96T60 521 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 NELL2Q99435 816 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 ULBP1Q9BZM6 244 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 KCNH6Q9H252 994 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 EBF3Q9H4W6 596 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 C8orf33Q9H7E9 229 aaPredicted RBP13.2□□□□□ -0.3
SGCE-201ENST00000265735 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 SMPD4Q9NXE4 827 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 PCDHGC3Q9UN70 934 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
SGCE-201ENST00000265735 THAP12O43422 761 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 CYP1A2P05177 515 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 MYBL1P10243 752 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 CD72P21854 359 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
SGCE-201ENST00000265735 EML3Q32P44 896 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 ITPRIPL2Q3MIP1 535 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 FAM3CQ92520 227 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 ZNF653Q96CK0 615 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 KLF16Q9BXK1 252 aaPredicted RBP13.19□□□□□ -0.3
SGCE-201ENST00000265735 LINC00597Q9H2U6 94 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
SGCE-201ENST00000265735 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 MTF2Q9Y483 593 aaPredicted RBP13.19□□□□□ -0.3
SGCE-201ENST00000265735 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
SGCE-201ENST00000265735 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 ZDBF2Q9HCK1 2354 aa13.19□□□□□ -0.3
SGCE-201ENST00000265735 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 STK25O00506 426 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 GREM1O60565 184 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ARSAP15289 507 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 CTHP32929 405 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 DAOAP59103 153 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ACTRT1Q8TDG2 376 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 NDRG1Q92597 394 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 CLDN23Q96B33 292 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 MS4A14Q96JA4 679 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 CDK5RAP1Q96SZ6 601 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 LHX5Q9H2C1 402 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 CFAP97Q9P2B7 532 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 CYTH4Q9UIA0 394 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 FAM170BA6NMN3 283 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 E7ENQ6 273 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 CEP104O60308 925 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
SGCE-201ENST00000265735 CYP1A1P04798 512 aaPredicted RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 RALAP11233 206 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 UNGP13051 313 aaPredicted RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 LCP1P13796 627 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 NSFP46459 744 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 SOX9P48436 509 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 IFNAR2P48551 515 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 RGS7P49802 495 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 TXNDC11Q6PKC3 985 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 TADA2BQ86TJ2 420 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 TMEM110Q86TL2 294 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 WBP2Q969T9 261 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 NACA2Q9H009 215 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
SGCE-201ENST00000265735 MRPS17Q9Y2R5 130 aaKnown RBP13.18□□□□□ -0.3
SGCE-201ENST00000265735 F5P12259 2224 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 PGRMC1O00264 195 aaKnown RBP13.17□□□□□ -0.3
SGCE-201ENST00000265735 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
SGCE-201ENST00000265735 FBXO21O94952 628 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
SGCE-201ENST00000265735 ACADSBP45954 432 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 VSNL1P62760 191 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 CENPCQ03188 943 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 UBXN2BQ14CS0 331 aa13.17□□□□□ -0.3
SGCE-201ENST00000265735 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms