RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ZBED1O96006 694 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 ATXN1P54253 815 aaKnown RBP23.33■■□□□ 1.33
MCF2L-201ENST00000261963 USP4Q13107 963 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 ALKAL1Q6UXT8 129 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 CATSPER4Q7RTX7 472 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 CAND1Q86VP6 1230 aaKnown RBP23.33■■□□□ 1.33
MCF2L-201ENST00000261963 ARHGAP24Q8N264 748 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 OR6B3Q8NGW1 331 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 MS4A4AQ96JQ5 239 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 MAGEB5Q9BZ81 275 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 G3BP2Q9UN86 482 aaKnown RBP23.33■■□□□ 1.33
MCF2L-201ENST00000261963 TTLL3Q9Y4R7 772 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 COMMD3-BMI1R4GMX3 469 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 A0A0G2JND7 137 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 PENKP01210 267 aaPredicted RBP23.33■■□□□ 1.33
MCF2L-201ENST00000261963 MT-ND3P03897 115 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 MAGEA6P43360 314 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 NEK3P51956 506 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 OVGP1Q12889 678 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 LIN52Q52LA3 116 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 PPP6R3Q5H9R7 873 aaPredicted RBP23.33■■□□□ 1.33
MCF2L-201ENST00000261963 C9orf57Q5W0N0 161 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 UNC93AQ86WB7 457 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 BEST2Q8NFU1 509 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 TUBGCP5Q96RT8 1024 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 NRDE2Q9H7Z3 1164 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 PNPLA8Q9NP80 782 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 ETNK2Q9NVF9 386 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 TAS2R1Q9NYW7 299 aa23.33■■□□□ 1.33
MCF2L-201ENST00000261963 SPAG6O75602 509 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 ESRRAP11474 423 aaPredicted RBP23.32■■□□□ 1.32
MCF2L-201ENST00000261963 DGKDQ16760 1214 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 CFAP36Q96G28 342 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 MAML3Q96JK9 1138 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 TRIM55Q9BYV6 548 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 NXF3Q9H4D5 531 aaKnown RBP23.32■■□□□ 1.32
MCF2L-201ENST00000261963 POPDC2Q9HBU9 364 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 IL1RAPL1Q9NZN1 696 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 IQANK1A0A1B0GTG1 560 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 CYP2F1P24903 491 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 L1CAMP32004 1257 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 ZBTB16Q05516 673 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 SEPT7Q16181 437 aaKnown RBP23.32■■□□□ 1.32
MCF2L-201ENST00000261963 LCA5Q86VQ0 697 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 ZDHHC17Q8IUH5 632 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 CCDC110Q8TBZ0 833 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 KBTBD7Q8WVZ9 684 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 HAPLN3Q96S86 360 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 OSMRQ99650 979 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 GCOM2Q9BZD3 368 aaPredicted RBP23.32■■□□□ 1.32
MCF2L-201ENST00000261963 VPS11Q9H270 941 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 CNTN3Q9P232 1028 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 MORF4L1Q9UBU8 362 aa23.32■■□□□ 1.32
MCF2L-201ENST00000261963 DNAJC6O75061 913 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 INHBAP08476 426 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 DHRS4L1P0CG22 281 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 CCDC130P13994 396 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 ETV4P43268 484 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 PTPN9P43378 593 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 CDK7P50613 346 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 SH3BGRP55822 239 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-201ENST00000261963 DSG1Q02413 1049 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 SLC18A2Q05940 514 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 SLC10A2Q12908 348 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-201ENST00000261963 LSAMPQ13449 338 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 DPP9Q86TI2 863 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 C7orf31Q8N865 590 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 CENPIQ92674 756 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-201ENST00000261963 MTMR10Q9NXD2 777 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 TMCO1Q9UM00 188 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 KAT6AQ92794 2004 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 ZNF487B1APH4 448 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 RECQL4O94761 1208 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 PGM1P36871 562 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 ARFIP2P53365 341 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 GBE1Q04446 702 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 GRB14Q14449 540 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 DPYSL2Q16555 572 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 IZUMO2Q6UXV1 221 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 SLC26A9Q7LBE3 791 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 OLFM3Q96PB7 478 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 FRMD8Q9BZ67 464 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-201ENST00000261963 KLC2Q9H0B6 622 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 ALG13Q9NP73 1137 aaKnown RBP23.31■■□□□ 1.32
MCF2L-201ENST00000261963 RALGAPA2Q2PPJ7 1873 aa23.31■■□□□ 1.32
MCF2L-201ENST00000261963 LPXNO60711 386 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 FAM155BO75949 473 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 APRTP07741 180 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 IMPDH2P12268 514 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
MCF2L-201ENST00000261963 KRT72Q14CN4 511 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 NOTUMQ6P988 496 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 IKBKGQ9Y6K9 419 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 CXorf49A8MYA2 514 aaPredicted RBP23.3■■□□□ 1.32
MCF2L-201ENST00000261963 SPTLC1O15269 473 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 PDGFRBP09619 1106 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 AKAP5P24588 427 aa23.3■■□□□ 1.32
MCF2L-201ENST00000261963 LMO2P25791 158 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms