RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NR2C2P49116 596 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 MORF4L2Q15014 288 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 KCNT2Q6UVM3 1135 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 RNF168Q8IYW5 571 aaPredicted RBP23.14■■□□□ 1.3
SIX3-201ENST00000260653 FBXO22Q8NEZ5 403 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 RNF34Q969K3 372 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 TSPYL1Q9H0U9 437 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 FBXO44Q9H4M3 255 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 FARP1Q9Y4F1 1045 aaPredicted RBP23.14■■□□□ 1.3
SIX3-201ENST00000260653 DUSP4Q13115 394 aa23.14■■□□□ 1.29
SIX3-201ENST00000260653 EIF4EBP2Q13542 120 aaPredicted RBP23.14■■□□□ 1.29
SIX3-201ENST00000260653 UHMK1Q8TAS1 419 aaKnown RBP23.14■■□□□ 1.29
SIX3-201ENST00000260653 CPT1BQ92523 772 aa23.14■■□□□ 1.29
SIX3-201ENST00000260653 SMOC2Q9H3U7 446 aa23.14■■□□□ 1.29
SIX3-201ENST00000260653 GMIPQ9P107 970 aa23.14■■□□□ 1.29
SIX3-201ENST00000260653 BCLAF3A2AJT9 711 aaKnown RBP23.13■■□□□ 1.29
SIX3-201ENST00000260653 WDR27A2RRH5 827 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA8KD6RF30 607 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 C2CD2LO14523 706 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 NUDT17P0C025 328 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 ANKRD22Q5VYY1 191 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 MFSD5Q6N075 450 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 DENND5BQ6ZUT9 1274 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 PRCCQ92733 491 aaPredicted RBP23.13■■□□□ 1.29
SIX3-201ENST00000260653 SHOC2Q9UQ13 582 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 PSMD5Q16401 504 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 MON1AQ86VX9 555 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 TMEM106CQ9BVX2 250 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 MTRRQ9UBK8 725 aa23.13■■□□□ 1.29
SIX3-201ENST00000260653 TPI1P60174 286 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 GAD2Q05329 585 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 IFFO1Q0D2I5 559 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 KCTD16Q68DU8 428 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 TRMT10CQ7L0Y3 403 aaKnown RBP23.12■■□□□ 1.29
SIX3-201ENST00000260653 RTP4Q96DX8 246 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 OLFM3Q96PB7 478 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 RBM15Q96T37 977 aaKnown RBP eCLIP23.12■■□□□ 1.29
SIX3-201ENST00000260653 GREB1Q4ZG55 1949 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 CFAP69A5D8W1 941 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA8MH3BSY2 632 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 ACSL3O95573 720 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 HAPLN1P10915 354 aaPredicted RBP23.12■■□□□ 1.29
SIX3-201ENST00000260653 SMARCB1Q12824 385 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 XRCC4Q13426 336 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 SLC45A4Q5BKX6 768 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 SLC8B1Q6J4K2 584 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 CDKL3Q8IVW4 592 aaPredicted RBP23.12■■□□□ 1.29
SIX3-201ENST00000260653 TMEM199Q8N511 208 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 OXCT2Q9BYC2 517 aaPredicted RBP23.12■■□□□ 1.29
SIX3-201ENST00000260653 IL37Q9NZH6 218 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 OR12D3Q9UGF7 316 aa23.12■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA6CA6NDK9 693 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 DCLK1O15075 740 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA6DP0CG33 693 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 OR1D2P34982 312 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 BASP1P80723 227 aaKnown RBP23.11■■□□□ 1.29
SIX3-201ENST00000260653 BTG3Q14201 252 aaPredicted RBP23.11■■□□□ 1.29
SIX3-201ENST00000260653 KIAA1841Q6NSI8 718 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 PPIL6Q8IXY8 311 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 QKIQ96PU8 341 aaKnown RBP eCLIP23.11■■□□□ 1.29
SIX3-201ENST00000260653 CENPHQ9H3R5 247 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA6AQ9NYA3 693 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 TCRBV7S3A2A0A539 114 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 MYZAPP0CAP1 466 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 ERCC2P18074 760 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 YWHAQP27348 245 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 KYNUQ16719 465 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 OTOP2Q7RTS6 562 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 PCGF5Q86SE9 256 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 SH2D3CQ8N5H7 860 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 NAT8LQ8N9F0 302 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 ZNF558Q96NG5 402 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 TMBIM4Q9HC24 238 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 NR2E3Q9Y5X4 410 aa23.11■■□□□ 1.29
SIX3-201ENST00000260653 MRPL42Q9Y6G3 142 aaKnown RBP23.11■■□□□ 1.29
SIX3-201ENST00000260653 FAM92AA1XBS5 289 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 GOLGA6L10A6NI86 522 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 SLC39A11Q8N1S5 342 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 FBXO32Q969P5 355 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 FOXP3Q9BZS1 431 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 PRDM16Q9HAZ2 1276 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 ARHGEF38Q9NXL2 777 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 NINJ2Q9NZG7 142 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 TMEM63AO94886 807 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 EIF3BP55884 814 aaKnown RBP23.1■■□□□ 1.29
SIX3-201ENST00000260653 KRT71Q3SY84 523 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 TP53INP2Q8IXH6 220 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 C2orf15Q8WU43 125 aaKnown RBP23.1■■□□□ 1.29
SIX3-201ENST00000260653 C9orf72Q96LT7 481 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 LGMNQ99538 433 aa23.1■■□□□ 1.29
SIX3-201ENST00000260653 LRIG2O94898 1065 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 TTC4O95801 387 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 SOD2P04179 222 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 HSPA1AP0DMV8 641 aaKnown RBP23.09■■□□□ 1.29
SIX3-201ENST00000260653 HSPA1BP0DMV9 641 aaKnown RBP23.09■■□□□ 1.29
SIX3-201ENST00000260653 ATF6P18850 670 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 ACTN2P35609 894 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 PAFAH1B3Q15102 231 aaKnown RBP23.09■■□□□ 1.29
SIX3-201ENST00000260653 SYCP2LQ5T4T6 812 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 CCDC110Q8TBZ0 833 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms