RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 GJC1P36383 396 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 GP5P40197 560 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 LIPEQ05469 1076 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PCDH1Q08174 1060 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 DPCR1Q3MIW9 517 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 STYK1Q6J9G0 422 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 HMBOX1Q6NT76 420 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 POTEAQ6S8J7 498 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 SUSD1Q6UWL2 747 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 RAD9BQ6WBX8 426 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 EEPD1Q7L9B9 569 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ASPGQ86U10 573 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ERO1BQ86YB8 467 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 EPHX4Q8IUS5 362 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 SRFBP1Q8NEF9 429 aaKnown RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 GRPEL2Q8TAA5 225 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 METTL6Q8TCB7 284 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TMEM80Q96HE8 168 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF845Q96IR2 970 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 RADILQ96JH8 1075 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 RIT2Q99578 217 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 FRMD8P1Q9BZ68 369 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TNKS2Q9H2K2 1166 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TRIM39Q9HCM9 518 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PARP2Q9UGN5 583 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CPA4Q9UI42 421 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 KCNJ18B7U540 433 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 KLRF2D3W0D1 207 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PLK4O00444 970 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CDK14O94921 469 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CRTAMO95727 393 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ACAA1P09110 424 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 RNF224P0DH78 156 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 HK1P19367 917 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 POLR2BP30876 1174 aaKnown RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CDKN1CP49918 316 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CHN2P52757 468 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 AP1S2P56377 157 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 MRPS9P82933 396 aaKnown RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 DBPQ10586 325 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 IDI1Q13907 227 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 KCNJ12Q14500 433 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 XKR9Q5GH70 373 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TCTE1Q5JU00 501 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PM20D1Q6GTS8 502 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 MZT2AQ6P582 158 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 NUP54Q7Z3B4 507 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ADGRG6Q86SQ4 1221 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 LPCAT1Q8NF37 534 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 SNX19Q92543 992 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 FRMD6Q96NE9 622 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TBC1D10AQ9BXI6 508 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF341Q9BYN7 854 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 AZI2Q9H6S1 392 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 EMILIN3Q9NT22 766 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 FAM153AQ9UHL3 310 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PALD1Q9ULE6 856 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TRIM35Q9UPQ4 493 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 EMSYQ7Z589 1322 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 C12orf71A8MTZ7 269 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 DNALI1O14645 258 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ZBTB24O43167 697 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SRGAP2O75044 1071 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 PSMG1O95456 288 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ZBTB48P10074 688 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MYCLP12524 364 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CAPN3P20807 821 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CHRNA5P30532 468 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ETV5P41161 510 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 YWHAEP62258 255 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 TARDBPQ13148 414 aaKnown RBP eCLIP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SERINC3Q13530 473 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 RAPSNQ13702 412 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 HNRNPDQ14103 355 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 FAM76BQ5HYJ3 339 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 PAPD7Q5XG87 772 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 SPOCD1Q6ZMY3 1216 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 C4orf50Q6ZRC1 276 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 RGS9BPQ6ZS82 235 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 TPH2Q8IWU9 490 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 U2AF1L4Q8WU68 220 aaKnown RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 NKD2Q969F2 451 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-201ENST00000258733 FBXW5Q969U6 566 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CHFRQ96EP1 664 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 ZDHHC12Q96GR4 267 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 LRGUKQ96M69 825 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 CAMK1GQ96NX5 476 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 NRBP2Q9NSY0 501 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 GDAP2Q9NXN4 497 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 COQ3Q9NZJ6 369 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 OR6C2Q9NZP2 312 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 KLHL9Q9P2J3 617 aa7.95□□□□□ -1.14
GPNMB-201ENST00000258733 HCN2Q9UL51 889 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms