RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RNF139Q8WU17 664 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 ADAM7Q9H2U9 754 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 WDCPQ9H6R7 721 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 ABCC13Q9NSE7 274 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 RRN3Q9NYV6 651 aa19.58■□□□□ 0.72
TRIM47-201ENST00000254816 BCCIPQ9P287 314 aaKnown RBP eCLIP19.58■□□□□ 0.72
TRIM47-201ENST00000254816 MRPL42Q9Y6G3 142 aaKnown RBP19.58■□□□□ 0.72
TRIM47-201ENST00000254816 WDR27A2RRH5 827 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 PSMD5Q16401 504 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 NCBP2-AS2Q69YL0 99 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 CASP10Q92851 521 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 TKTL2Q9H0I9 626 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 AAASQ9NRG9 546 aa19.57■□□□□ 0.72
TRIM47-201ENST00000254816 ZNF487B1APH4 448 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 MSI1O43347 362 aaKnown RBP19.56■□□□□ 0.72
TRIM47-201ENST00000254816 OR1D2P34982 312 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 PSTKQ8IV42 348 aaKnown RBP19.56■□□□□ 0.72
TRIM47-201ENST00000254816 RNF168Q8IYW5 571 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-201ENST00000254816 SPPL2BQ8TCT7 592 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 RNF34Q969K3 372 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 SLC9A7Q96T83 725 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 PCDH9Q9HC56 1237 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 ARHGEF4Q9NR80 690 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 MYO1CO00159 1063 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 DNALI1O14645 258 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-201ENST00000254816 CXCR3P49682 368 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 PMS2P54278 862 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 KIAA1841Q6NSI8 718 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 GIPC2Q8TF65 315 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 NTAN1Q96AB6 310 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 GMIPQ9P107 970 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 MTRRQ9UBK8 725 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 SCML2Q9UQR0 700 aa19.56■□□□□ 0.72
TRIM47-201ENST00000254816 F9P00740 461 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 RBL1P28749 1068 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 RPL22P35268 128 aaKnown RBP19.55■□□□□ 0.72
TRIM47-201ENST00000254816 HIBCHQ6NVY1 386 aaPredicted RBP19.55■□□□□ 0.72
TRIM47-201ENST00000254816 DENND5BQ6ZUT9 1274 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 ZNF558Q96NG5 402 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 SEMA4AQ9H3S1 761 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 ZBBXA8MT70 800 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 H3BRJ5 948 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 EEF2KO00418 725 aaKnown RBP19.55■□□□□ 0.72
TRIM47-201ENST00000254816 IGLV3-25P01717 112 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 HAPLN1P10915 354 aaPredicted RBP19.55■□□□□ 0.72
TRIM47-201ENST00000254816 SLC39A11Q8N1S5 342 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 CCHCR1Q8TD31 782 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 EPB41L4BQ9H329 900 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
TRIM47-201ENST00000254816 KCNN4O15554 427 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 IRAK2O43187 625 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 SCAPQ12770 1279 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 ARL13BQ3SXY8 428 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 RFX8Q6ZV50 586 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 COLGALT1Q8NBJ5 622 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 TMEM169Q96HH4 297 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 CLSTN3Q9BQT9 956 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 TRIM62Q9BVG3 475 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 USP29Q9HBJ7 922 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 DTLQ9NZJ0 730 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 TPX2Q9ULW0 747 aaKnown RBP19.54■□□□□ 0.72
TRIM47-201ENST00000254816 NR2E3Q9Y5X4 410 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 NUP205Q92621 2012 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 MFSD11O43934 449 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 SOD2P04179 222 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 ZFXP17010 805 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-201ENST00000254816 LSP1P33241 339 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 SLC8B1Q6J4K2 584 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 BEND5Q7L4P6 421 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 MON1AQ86VX9 555 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 C10orf67Q8IYJ2 551 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 BBOF1Q8ND07 529 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 FBXO32Q969P5 355 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 YME1L1Q96TA2 773 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 FAM129AQ9BZQ8 928 aa19.54■□□□□ 0.72
TRIM47-201ENST00000254816 RCOR3Q9P2K3 495 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-201ENST00000254816 ATF6P18850 670 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 YWHAQP27348 245 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 AIF1P55008 147 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 CAV1Q03135 178 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 SEMA3BQ13214 749 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 EIF4EBP2Q13542 120 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-201ENST00000254816 TP53INP2Q8IXH6 220 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 UHMK1Q8TAS1 419 aaKnown RBP19.53■□□□□ 0.72
TRIM47-201ENST00000254816 AUTS2Q8WXX7 1259 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 SMOC2Q9H3U7 446 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 SHROOM3Q8TF72 1996 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 SHBGP04278 402 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 TAF10Q12962 218 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 DPYSQ14117 519 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 KRT71Q3SY84 523 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 RNASEH2BQ5TBB1 312 aaKnown RBP19.53■□□□□ 0.72
TRIM47-201ENST00000254816 CMTR2Q8IYT2 770 aaKnown RBP19.53■□□□□ 0.72
TRIM47-201ENST00000254816 BADQ92934 168 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 IL37Q9NZH6 218 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 OR12D3Q9UGF7 316 aa19.53■□□□□ 0.72
TRIM47-201ENST00000254816 MAGED2Q9UNF1 606 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-201ENST00000254816 EFCAB14O75071 495 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms