RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MBTD1Q05BQ5 628 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 PPM1LQ5SGD2 360 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SLC24A5Q71RS6 500 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 AENQ8WTP8 325 aaKnown RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 KCNK16Q96T55 309 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 ILKAPQ9H0C8 392 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 NPHS2Q9NP85 383 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 PCDHGC3Q9UN70 934 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 C4BP0C0L5 1744 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 RNF103O00237 685 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SLC9A3R1O14745 358 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 MPOP05164 745 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 ITGA9Q13797 1035 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 TAF11Q15544 211 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 KRT80Q6KB66 452 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 EPS8L3Q8TE67 593 aaKnown RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 XPNPEP1Q9NQW7 623 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 DNPEPQ9ULA0 475 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SMIM28A0A1B0GU29 152 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 SYCE1LA8MT33 242 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 GLP2RO95838 553 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 MMP8P22894 467 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 GP5P40197 560 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 MATKP42679 507 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 HIC1Q14526 733 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 GRTP1Q5TC63 336 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 SPPL2BQ8TCT7 592 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 KREMEN1Q96MU8 473 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FZD8Q9H461 694 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 SUDS3Q9H7L9 328 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ATP13A1Q9HD20 1204 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ADA2Q9NZK5 511 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ZNF284Q2VY69 593 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 BRMS1LQ5PSV4 323 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 HECTD3Q5T447 861 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 METTL3Q86U44 580 aaKnown RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 NUP93Q8N1F7 819 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ARMC2Q8NEN0 867 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FGFBP2Q9BYJ0 223 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FAM153AQ9UHL3 310 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FSCN2O14926 492 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 CILPO75339 1184 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 CHI3L2Q15782 390 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 KBTBD12Q3ZCT8 623 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 PDPK2PQ6A1A2 396 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 C16orf89Q6UX73 402 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 STRADAQ7RTN6 431 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FAM9CQ8IZT9 166 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 MYLPFQ96A32 169 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 SPATA16Q9BXB7 569 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 MRPL1Q9BYD6 325 aaKnown RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 C5P01031 1676 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 CLASP2O75122 1294 aaKnown RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 CAPN15O75808 1086 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 MAP3K6O95382 1288 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 ITGAVP06756 1048 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 PLA2G4AP47712 749 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 VSTM1Q6UX27 236 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 DPF3Q92784 378 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 N4BP2L2Q92802 583 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 KLF6Q99612 283 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-201ENST00000253251 CLPBQ9H078 707 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 DNMT3LQ9UJW3 386 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 COQ4Q9Y3A0 265 aa15.41■□□□□ 0.06
UBE4B-201ENST00000253251 A0A0A0MRY4 1105 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 CBX4O00257 560 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 MAPK8P45983 427 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 GRAMD1BQ3KR37 738 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ANGPTL8Q6UXH0 198 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 ILDR2Q71H61 639 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 STRA8Q7Z7C7 330 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 FAM35AQ86V20 835 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 CATSPER1Q8NEC5 780 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SEMA4DQ92854 862 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 PGLYRP2Q96PD5 576 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 NXF3Q9H4D5 531 aaKnown RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 RCOR3Q9P2K3 495 aaPredicted RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 PECAM1P16284 738 aaPredicted RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 SPIRE1Q08AE8 756 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 DNAJC3Q13217 504 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 CUL3Q13618 768 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 DPYSL3Q14195 570 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 TMA16Q96EY4 203 aaKnown RBP15.4■□□□□ 0.06
UBE4B-201ENST00000253251 PGM2Q96G03 612 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 C22orf31O95567 290 aa15.4■□□□□ 0.06
UBE4B-201ENST00000253251 GJB1P08034 283 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms