RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 NETO2Q8NC67 525 aa16.35■□□□□ 0.21
SLC6A8-201ENST00000253122 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
SLC6A8-201ENST00000253122 MRPL4Q9BYD3 311 aaKnown RBP16.35■□□□□ 0.21
SLC6A8-201ENST00000253122 TMEM39BQ9GZU3 492 aa16.35■□□□□ 0.21
SLC6A8-201ENST00000253122 ABCD1P33897 745 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 MLH1P40692 756 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 MAPK10P53779 464 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 LSAMPQ13449 338 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 CYP2R1Q6VVX0 501 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 FBXW8Q8N3Y1 598 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 TDRD5Q8NAT2 981 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 OLIG1Q8TAK6 271 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 CRYGNQ8WXF5 182 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 OCEL1Q9H607 264 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 KCNK13Q9HB14 408 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 ADAMTS6Q9UKP5 1117 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 SORCS3Q9UPU3 1222 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 ITM2AO43736 263 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 ZNF862O60290 1169 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 ASLP04424 464 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 CASP2P42575 452 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 NOVP48745 357 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 FRMD8Q9BZ67 464 aaPredicted RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 ZNF518BQ9C0D4 1074 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 TJP2Q9UDY2 1190 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 SLC39A10Q9ULF5 831 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 CNTNAP2Q9UHC6 1331 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 YWHAZP63104 245 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 UNC5AQ6ZN44 842 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 SH3BP5LQ7L8J4 393 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 MRPL46Q9H2W6 279 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 WDR55Q9H6Y2 383 aaPredicted RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 IL1RL2Q9HB29 575 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 BFARQ9NZS9 450 aa16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 WARS2Q9UGM6 360 aaKnown RBP16.34■□□□□ 0.21
SLC6A8-201ENST00000253122 LTBP1Q14766 1721 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 TRMUO75648 421 aaKnown RBP16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 CSH1P0DML2 217 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 CSH2P0DML3 217 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 IL1R2P27930 398 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 SNX16P57768 344 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 PPM1JQ5JR12 505 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 KYAT3Q6YP21 454 aaKnown RBP16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 TSPAN14Q8NG11 270 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 CXorf38Q8TB03 319 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 ADAM32Q8TC27 787 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 CYGBQ8WWM9 190 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 CDHR1Q96JP9 859 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 RRN3Q9NYV6 651 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 PTTG2Q9NZH5 202 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 COL20A1Q9P218 1284 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 NUMBLQ9Y6R0 609 aa16.33■□□□□ 0.21
SLC6A8-201ENST00000253122 TRDMT1O14717 391 aaKnown RBP16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 MT-CO1P00395 513 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 PTK2BQ14289 1009 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 TTC33Q6PID6 262 aaPredicted RBP16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 LIN28AQ9H9Z2 209 aaKnown RBP16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 EFCAB1Q9HAE3 211 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 SLC17A6Q9P2U8 582 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 DOLKQ9UPQ8 538 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 CCNE2O96020 404 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 C4BPAP04003 597 aaKnown RBP16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ERVK-10P10266 1014 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 EPHA3P29320 983 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ATP1A4Q13733 1029 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 SURF1Q15526 300 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 TBC1D25Q3MII6 688 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ITPRIPL1Q6GPH6 555 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 GPR141Q7Z602 305 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 LRRC71Q8N4P6 559 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 PCDH20Q8N6Y1 951 aaKnown RBP16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 PSMD13Q9UNM6 376 aa16.33■□□□□ 0.2
SLC6A8-201ENST00000253122 ZNF536O15090 1300 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 TNFSF9P41273 254 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 NR1H2P55055 460 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 ABCE1P61221 599 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 SPP2Q13103 211 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 CMC1Q7Z7K0 106 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 IFNEQ86WN2 208 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 RNF34Q969K3 372 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 MID2Q9UJV3 735 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 SDR42E2A6NKP2 422 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 CHADO15335 359 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 HSPA8P11142 646 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 ME2P23368 584 aa16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 EIF4BP23588 611 aaKnown RBP16.32■□□□□ 0.2
SLC6A8-201ENST00000253122 MGAT1P26572 445 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms