RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CCNYQ8ND76 341 aa26.36■■□□□ 1.81
RAB40C-201ENST00000248139 TRIM6Q9C030 488 aaPredicted RBP26.36■■□□□ 1.81
RAB40C-201ENST00000248139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.36■■□□□ 1.81
RAB40C-201ENST00000248139 CCDC6Q16204 474 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 DCAF6Q58WW2 860 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 ATG14Q6ZNE5 492 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 TEX9Q8N6V9 391 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 NRG4Q8WWG1 115 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 ATXN7L3BQ96GX2 97 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 QKIQ96PU8 341 aaKnown RBP eCLIP26.35■■□□□ 1.81
RAB40C-201ENST00000248139 DCAF8L1A6NGE4 600 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 BEST1O76090 585 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 CCNFP41002 786 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 ZBTB6Q15916 424 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 SLC26A9Q7LBE3 791 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 DCLRE1BQ9H816 532 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 LRRC42Q9Y546 428 aa26.35■■□□□ 1.81
RAB40C-201ENST00000248139 KLF11O14901 512 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 USP12O75317 370 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 BPGMP07738 259 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 RARBP10826 455 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 BST2Q10589 180 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 CTU1Q7Z7A3 348 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 ANKRD52Q8NB46 1076 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 BEST2Q8NFU1 509 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 ADAM32Q8TC27 787 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 TFB1MQ8WVM0 346 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 FRMD8Q9BZ67 464 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 RNF181Q9P0P0 153 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 PGM1P36871 562 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 PTPN9P43378 593 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 SULT1E1P49888 294 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 SOX4Q06945 474 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 NME3Q13232 169 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 THOC5Q13769 683 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 SLC27A1Q6PCB7 646 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 FASTKD5Q7L8L6 764 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 RBM15BQ8NDT2 890 aaKnown RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 CENPIQ92674 756 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-201ENST00000248139 FAM161BQ96MY7 647 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 ADAMTS10Q9H324 1103 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 ZNF358Q9NW07 568 aa26.34■■□□□ 1.81
RAB40C-201ENST00000248139 TPP1O14773 563 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 ALDOAP04075 364 aaKnown RBP26.33■■□□□ 1.81
RAB40C-201ENST00000248139 DESP17661 470 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 ABCG1P45844 678 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 ADIGQ0VDE8 80 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 KYAT1Q16773 422 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 ATG16L1Q676U5 607 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 PPP1R14CQ8TAE6 165 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 FBXO41Q8TF61 875 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 USP6NLQ92738 828 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 LENG1Q96BZ8 264 aaPredicted RBP26.33■■□□□ 1.81
RAB40C-201ENST00000248139 AGAP3Q96P47 875 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 KATNBL1Q9H079 304 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 MOCS1Q9NZB8 636 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 BPTFQ12830 3046 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 MEI4A8MW99 385 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 PRR5-ARHGAP8B1AHC4 643 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 KCNK1O00180 336 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 CAPN9O14815 690 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 TBX10O75333 385 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 GSRP00390 522 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 PSMB4P28070 264 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 MLH1P40692 756 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 ARHGAP8P85298 464 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 SEMA5AQ13591 1074 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 FASTKD1Q53R41 847 aaKnown RBP26.33■■□□□ 1.81
RAB40C-201ENST00000248139 CRLF3Q8IUI8 442 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 NME8Q8N427 588 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 GPRC5AQ8NFJ5 357 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 TMEM40Q8WWA1 233 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 P2RY11Q96G91 374 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 C7orf26Q96N11 449 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.33■■□□□ 1.81
RAB40C-201ENST00000248139 EMCNQ9ULC0 261 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 WASF2Q9Y6W5 498 aa26.33■■□□□ 1.81
RAB40C-201ENST00000248139 SETSIPP0DME0 302 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 ERVK-10P10266 1014 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 TPSB2P20231 275 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 STX3Q13277 289 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 TPSAB1Q15661 275 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 FBXO47Q5MNV8 452 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 PRAMEF19Q5SWL8 479 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 N4BP2L1Q5TBK1 243 aaPredicted RBP26.32■■□□□ 1.8
RAB40C-201ENST00000248139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.32■■□□□ 1.8
RAB40C-201ENST00000248139 TTC39CQ8N584 583 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.32■■□□□ 1.81e-6■■■□□ 14.6
RAB40C-201ENST00000248139 LRRC39Q96DD0 335 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 NMRK1Q9NWW6 199 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 KCNK4Q9NYG8 393 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 HBS1LQ9Y450 684 aaKnown RBP26.32■■□□□ 1.8
RAB40C-201ENST00000248139 USP3Q9Y6I4 520 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 KPNA7A9QM74 516 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 RNF103O00237 685 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 CRHR1P34998 444 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 KRT72Q14CN4 511 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 SYPL2Q5VXT5 272 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 PIGZQ86VD9 579 aa26.32■■□□□ 1.8
RAB40C-201ENST00000248139 SMC1BQ8NDV3 1235 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms