RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 KRT10P13645 584 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 ATF6P18850 670 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 OGDHQ02218 1023 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 DNAJC24Q6P3W2 148 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 EMILIN2Q9BXX0 1053 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 MAGED2Q9UNF1 606 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 SSX2IPQ9Y2D8 614 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 LPXNO60711 386 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 ADH1AP07327 375 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 ELF1P32519 619 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 GABRB2P47870 512 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 SMAD3P84022 425 aaKnown RBP17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 GKAP1Q5VSY0 366 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 KAZNQ674X7 775 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 VSTM1Q6UX27 236 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 CABS1Q96KC9 395 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 HSFY1Q96LI6 401 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 PRMT1Q99873 361 aaKnown RBP17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 NGRNQ9NPE2 291 aaKnown RBP17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 NINJ2Q9NZG7 142 aa17.6■□□□□ 0.41
CDKN1A-201ENST00000244741 PGFP49763 221 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 IZUMO3Q5VZ72 239 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 OLFML1Q6UWY5 402 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 MFSD7Q6UXD7 560 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 HFE2Q6ZVN8 426 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 RCOR2Q8IZ40 523 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 CCDC89Q8N998 374 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 SERPINB12Q96P63 405 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 SLITRK1Q96PX8 696 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 IRAK3Q9Y616 596 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 TNFRSF10BO14763 440 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 RFC1P35251 1148 aaPredicted RBP17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 FBXW10Q5XX13 1052 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 TXNRD3NBQ6F5E7 133 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 DCUN1D2Q6PH85 259 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 SLC7A14Q8TBB6 771 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 KCTD13Q8WZ19 329 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 FAM149B1Q96BN6 582 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 ZNF576Q9H609 170 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 CTNNAL1Q9UBT7 734 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 STRIP2Q9ULQ0 834 aa17.59■□□□□ 0.41
CDKN1A-201ENST00000244741 YJEFN3A6XGL0 299 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 FOXO6A8MYZ6 492 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 E7ENQ6 273 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 KRT1P04264 644 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 KRT3P12035 628 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 CREB1P16220 341 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 EPCAMP16422 314 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 MAGEA11P43364 429 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 CREMQ03060 361 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 TWF1Q12792 350 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 SMARCB1Q12824 385 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 SPRED3Q2MJR0 410 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 RAB41Q5JT25 222 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 ZFYVE27Q5T4F4 411 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 CCDC121Q6ZUS5 278 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 TAOK1Q7L7X3 1001 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 LRRC34Q8IZ02 419 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 GLIS1Q8NBF1 620 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 FAM161BQ96MY7 647 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 DNPEPQ9ULA0 475 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 YIPF1Q9Y548 306 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 PLXNA3P51805 1871 aa17.58■□□□□ 0.4
CDKN1A-201ENST00000244741 LIASO43766 372 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 GLUD1P00367 558 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ACADSBP45954 432 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 RPL34P49207 117 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 CLCN4P51793 760 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 SLC6A3Q01959 620 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ACTN3Q08043 901 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ZNF268Q14587 947 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 PPP1R15BQ5SWA1 713 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ZNF697Q5TEC3 545 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 DENND5BQ6ZUT9 1274 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 KREMEN2Q8NCW0 462 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ARHGEF2Q92974 986 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 RBM41Q96IZ5 413 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 C8orf48Q96LL4 319 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 CCDC134Q9H6E4 229 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 CLASP2O75122 1294 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 ZBED1O96006 694 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 CETN2P41208 172 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 IFNAR2P48551 515 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 NRIP1P48552 1158 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 TUFMP49411 452 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 TRNP1Q6NT89 227 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 HIBCHQ6NVY1 386 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 NUP93Q8N1F7 819 aa17.57■□□□□ 0.4
CDKN1A-201ENST00000244741 EDEM1Q92611 657 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms