RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 ASTN1O14525 1302 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 E9PMD0 336 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 COPEO14579 308 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 TNPO2O14787 897 aaKnown RBP13.39□□□□□ -0.27
MSH2-201ENST00000233146 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 NPTX1Q15818 432 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 CDK5RAP1Q96SZ6 601 aaKnown RBP13.39□□□□□ -0.27
MSH2-201ENST00000233146 RTKNQ9BST9 563 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
MSH2-201ENST00000233146 CCRL2O00421 344 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 XRCC1P18887 633 aaPredicted RBP13.39□□□□□ -0.27
MSH2-201ENST00000233146 MAP4P27816 1152 aaKnown RBP13.39□□□□□ -0.27
MSH2-201ENST00000233146 DNASE1L3Q13609 305 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 C16orf46Q6P387 395 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 NUDCD3Q8IVD9 361 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 SERPINI1Q99574 410 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 ISCA1Q9BUE6 129 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 SLC27A5Q9Y2P5 690 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 SPEF1Q9Y4P9 236 aa13.39□□□□□ -0.27
MSH2-201ENST00000233146 SMCO2A6NFE2 343 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ZMPSTE24O75844 475 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 COX4I1P13073 169 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 FGFR2P21802 821 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 GPS1Q13098 491 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 GRM4Q14833 912 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 PLEKHG7Q6ZR37 379 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ELMOD2Q8IZ81 293 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 C8orf48Q96LL4 319 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 NXF1Q9UBU9 619 aaKnown RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 EDIL3O43854 480 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ARSEP51690 589 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 NAPAP54920 295 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 TMBIM6P55061 237 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 UBE2UQ5VVX9 321 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
MSH2-201ENST00000233146 BHLHE22Q8NFJ8 381 aaPredicted RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ZNF778Q96MU6 729 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 COQ7Q99807 217 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 SUCOQ9UBS9 1254 aaKnown RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 HTRA2O43464 458 aaPredicted RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 FAM155BO75949 473 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 MYL4P12829 197 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 KRT10P13645 584 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ETS1P14921 441 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 CYP7A1P22680 504 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 STX1BP61266 288 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 MS4A2Q01362 244 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 HIF1AQ16665 826 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 NHSL2Q5HYW2 709 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 UGT3A1Q6NUS8 523 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ABHD11Q8NFV4 315 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 RMDN1Q96DB5 314 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 WDR83Q9BRX9 315 aaKnown RBP13.38□□□□□ -0.27
MSH2-201ENST00000233146 ZHX3Q9H4I2 956 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 C6orf50Q9HD87 102 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 VPS28Q9UK41 221 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 ZHX2Q9Y6X8 837 aa13.38□□□□□ -0.27
MSH2-201ENST00000233146 MAGEB6P1A0A0J9YX57 407 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 TAF4O00268 1085 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 CLIC2O15247 247 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 PRKCQQ04759 706 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 RALGDSQ12967 914 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 GLRX5Q86SX6 157 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 TNIP2Q8NFZ5 429 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 KLHL32Q96NJ5 620 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 OR2B2Q9GZK3 357 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 POLR1BQ9H9Y6 1135 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 HMG20AQ9NP66 347 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 ARAP2Q8WZ64 1704 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 B8ZZF3 427 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms