RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 C10orf88Q9H8K7 445 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 KLHL2O95198 593 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 FBXL19Q6PCT2 694 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 WDR59Q6PJI9 974 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 HTR3CQ8WXA8 447 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 ABCC13Q9NSE7 274 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 SHOC2Q9UQ13 582 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 GOLGA8TH3BQL2 631 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 MIPP30301 263 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 CHI3L1P36222 383 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-201ENST00000223398 GLT6D1Q7Z4J2 308 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 SYTL1Q8IYJ3 562 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 SERAC1Q96JX3 654 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 TRAV19A0A0A6YYK7 116 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ITGA7Q13683 1181 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 C15orf59Q2T9L4 293 aaPredicted RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 PLPPR4Q7Z2D5 763 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 DCDC2Q9UHG0 476 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 TRPC5OSA6NMA1 111 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 CCNT2O60583 730 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 MT-CO1P00395 513 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 HMGCRP04035 888 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 APOA4P06727 396 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 DSG4Q86SJ6 1040 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 TMEM159Q96B96 161 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ACOX2Q99424 681 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 WDR27A2RRH5 827 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 CPSF4O95639 269 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ATP5BP06576 529 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 HSPA1AP0DMV8 641 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 HSPA1BP0DMV9 641 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 CCNG2Q16589 344 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 DENND1CQ8IV53 801 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 FTHL17Q9BXU8 183 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 SEC24CP53992 1094 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 MFSD7Q6UXD7 560 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 KIAA1324Q6UXG2 1013 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 FBXL16Q8N461 479 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ZNF555Q8NEP9 628 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ABTB1Q969K4 478 aaPredicted RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ACO2Q99798 780 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 MTO1Q9Y2Z2 717 aaKnown RBP18.93■□□□□ 0.62
CLIP2-201ENST00000223398 ACOT9Q9Y305 439 aa18.93■□□□□ 0.62
CLIP2-201ENST00000223398 PIK3CDO00329 1044 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 KATNA1O75449 491 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 USP2O75604 605 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 TJAP1Q5JTD0 557 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 HECTD3Q5T447 861 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 PLPP4Q5VZY2 271 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 RSPH1Q8WYR4 309 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CMTM5Q96DZ9 223 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 VMP1Q96GC9 406 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 NDOR1Q9UHB4 597 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 APPL1Q9UKG1 709 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 USP12O75317 370 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 SERPINB5P36952 375 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CRYBB1P53674 252 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 SKOR1P84550 965 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 USP41Q3LFD5 358 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 NECAB2Q7Z6G3 386 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CEP70Q8NHQ1 597 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 FBXO25Q8TCJ0 367 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 ACTR8Q9H981 624 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 RIPK3Q9Y572 518 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 RNF103O00237 685 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 MGAT1P26572 445 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 ZNF697Q5TEC3 545 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 SPATA20Q8TB22 786 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CYGBQ8WWM9 190 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 MYLPFQ96A32 169 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 OMDQ99983 421 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 DCLK3Q9C098 648 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 RNPEPQ9H4A4 650 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 SYTL2Q9HCH5 934 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 PTPRHQ9HD43 1115 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CTNNAL1Q9UBT7 734 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 A0A0A6YYK5 440 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CNTN1Q12860 1018 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CDH17Q12864 832 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 DDR2Q16832 855 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 MARK2Q7KZI7 788 aaKnown RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 LENG1Q96BZ8 264 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CERS4Q9HA82 394 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 H2AFY2Q9P0M6 372 aaPredicted RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 F8VP50 259 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 NDUFB5O43674 189 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 UROC1Q96N76 676 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 SERPINB12Q96P63 405 aa18.92■□□□□ 0.62
CLIP2-201ENST00000223398 PABPC3Q9H361 631 aaKnown RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 CDC42EP4Q9H3Q1 356 aaKnown RBP18.92■□□□□ 0.62
CLIP2-201ENST00000223398 MGAT4DA6NG13 374 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 CXCL14O95715 111 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 PHF21BQ96EK2 531 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 TBCBQ99426 244 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 VIPAS39Q9H9C1 493 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 WHRNQ9P202 907 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 PFDN1O60925 122 aa18.91■□□□□ 0.62
CLIP2-201ENST00000223398 BRCC3P46736 316 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms