RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CPVLQ9H3G5 476 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 KCNK4Q9NYG8 393 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 COMMD9Q9P000 198 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SPTLC1O15269 473 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 GABBR2O75899 941 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 TKTP29401 623 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 OLFML2AQ68BL7 652 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 RNASE11Q8TAA1 199 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 SH3KBP1Q96B97 665 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 PCDHGC5Q9Y5F6 944 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 CCDC154A6NI56 674 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 EPC2Q52LR7 807 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 KRT35Q92764 455 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 IQCMA0A1B0GVH7 501 aa11.33□□□□□ -0.59
USP31-201ENST00000219689 C2orf71A6NGG8 1288 aa11.33□□□□□ -0.59
USP31-201ENST00000219689 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.59
USP31-201ENST00000219689 GSDMCQ9BYG8 508 aa11.33□□□□□ -0.59
USP31-201ENST00000219689 SIN3BO75182 1162 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ASNSP08243 561 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 DEFA5Q01523 94 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 FAM83EQ2M2I3 478 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 CDC73Q6P1J9 531 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 PTPRHQ9HD43 1115 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ZMYM2Q9UBW7 1377 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 MYL12BO14950 172 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 PRIM2P49643 509 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 CAMK1DQ8IU85 385 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 DCUN1D1Q96GG9 259 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 TMCC3Q9ULS5 477 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 EDARQ9UNE0 448 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 NDUFS3O75489 264 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 SFNP31947 248 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 TPI1P60174 286 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 TMEM121Q9BTD3 319 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 LATS2Q9NRM7 1088 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP31-201ENST00000219689 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 PRELPP51888 382 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 PTPN20Q4JDL3 420 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ATP6AP1LQ52LC2 224 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 CPDO75976 1380 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 FAM237BA0A1B0GVD1 139 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 SAMD4BQ5PRF9 694 aaKnown RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 PACS1Q6VY07 963 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 IPMKQ8NFU5 416 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ITFG1Q8TB96 612 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 CLPTM1LQ96KA5 538 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 S100A14Q9HCY8 104 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 KRCC1Q9NPI7 259 aaPredicted RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 WDR62O43379 1518 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 C3orf70A6NLC5 250 aaPredicted RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 PDE2AO00408 941 aaPredicted RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 RARAP10276 462 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 STX4Q12846 297 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 SYTL3Q4VX76 610 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 EBF3Q9H4W6 596 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 VBP1P61758 197 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 C2CD6Q53TS8 623 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 EHD1Q9H4M9 534 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 CPNE3O75131 537 aaKnown RBP11.33□□□□□ -0.6
USP31-201ENST00000219689 CPA3P15088 417 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 GARTP22102 1010 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 TGFBR2P37173 567 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 ZNF605Q86T29 641 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 HIPK1Q86Z02 1210 aa11.33□□□□□ -0.6
USP31-201ENST00000219689 PI4KAP42356 2102 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 H3BNX3 289 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 ADORA2BP29275 332 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 CDK7P50613 346 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 TFDP3Q5H9I0 405 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 PHC2Q8IXK0 858 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 EIF2AK1Q9BQI3 630 aaKnown RBP11.32□□□□□ -0.6
USP31-201ENST00000219689 MED28Q9H204 178 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 BARX2Q9UMQ3 279 aaPredicted RBP11.32□□□□□ -0.6
USP31-201ENST00000219689 SQORQ9Y6N5 450 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 SF3B1O75533 1304 aaKnown RBP eCLIP11.32□□□□□ -0.69e-7■■■■■ 57.4
USP31-201ENST00000219689 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
USP31-201ENST00000219689 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 TFPTP0C1Z6 253 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 RIPK1Q13546 671 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 SLC44A2Q8IWA5 706 aaPredicted RBP11.32□□□□□ -0.6
USP31-201ENST00000219689 ZNF276Q8N554 614 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
USP31-201ENST00000219689 NSMCE2Q96MF7 247 aa11.32□□□□□ -0.6
USP31-201ENST00000219689 ZSCAN5AQ9BUG6 496 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms