RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 DHX33Q9H6R0 707 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 QTRT2Q9H974 415 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 KLHL11Q9NVR0 708 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 USE1Q9NZ43 259 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ARHGAP20Q9P2F6 1191 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RPS6KA6Q9UK32 745 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 DMTF1Q9Y222 760 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PEAK1Q9H792 1746 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MRC1P22897 1456 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FKBP9O95302 570 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PSMG1O95456 288 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 KRT6AP02538 564 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RPN2P04844 631 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NR3C2P08235 984 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PLEKP08567 350 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZNF23P17027 643 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TGFBR2P37173 567 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MMP13P45452 471 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 OTUD4Q01804 1114 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 MPP3Q13368 585 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ARMC3Q5W041 872 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 IYDQ6PHW0 289 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MYO1HQ8N1T3 1032 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MINDY2Q8NBR6 621 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 B4GALNT2Q8NHY0 566 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 DDX17Q92841 729 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZNF408Q9H9D4 720 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 KRT84Q9NSB2 600 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MARCOQ9UEW3 520 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 RAB26Q9ULW5 256 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NDUFAF1Q9Y375 327 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 KPNA5O15131 536 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZSCAN9O15535 394 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 RAB25P57735 213 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PPP1R15BQ5SWA1 713 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SNX30Q5VWJ9 437 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TDRD10Q5VZ19 366 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PNPT1Q8TCS8 783 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 HELQQ8TDG4 1101 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FNIP1Q8TF40 1166 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MCCC1Q96RQ3 725 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 AGO4Q9HCK5 861 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 SARS2Q9NP81 518 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 LATS2Q9NRM7 1088 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHD9-201ENST00000219084 CRNNQ9UBG3 495 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 PIN4Q9Y237 131 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHD9-201ENST00000219084 C2CD2LO14523 706 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NEMP1O14524 444 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SLC37A4O43826 429 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TRIM13O60858 407 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 KRT34O76011 436 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 GLP2RO95838 553 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 LDLRP01130 860 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SUPT20HL2P0C7V6 817 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 PRIM2P49643 509 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 OASLQ15646 514 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 CROCCQ5TZA2 2017 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZCCHC8Q6NZY4 707 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 SZRD1Q7Z422 152 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 EXOC3L1Q86VI1 746 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 OR2W6PQ8NHA6 318 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MDM1Q8TC05 714 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FBXO25Q8TCJ0 367 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RORBQ92753 470 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM176AQ96HP8 235 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MYLK2Q9H1R3 596 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 WWOXQ9NZC7 414 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RIC1Q4ADV7 1423 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TXNP10599 105 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 IMPDH2P12268 514 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ITGA4P13612 1032 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 FGFR2P21802 821 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ADSLP30566 484 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 SKP1P63208 163 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TUBA4AP68366 448 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 LLGL1Q15334 1064 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 CDC73Q6P1J9 531 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ABRAXAS1Q6UWZ7 409 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 C15orf52Q6ZUT6 534 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 DEFB107AQ8IZN7 70 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 TMEM109Q9BVC6 243 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 MUC3BQ9H195 1237 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SCUBE2Q9NQ36 999 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SLX4Q8IY92 1834 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 FAM220BPB1ANY3 271 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NPM3O75607 178 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 RHOBTB1O94844 696 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 SEC24DO94855 1032 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 RTN3O95197 1032 aaPredicted RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 GUCA1CO95843 209 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 NCAM1P13591 858 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 VCAM1P19320 739 aa4.52□□□□□ -1.69
CHD9-201ENST00000219084 RPL5P46777 297 aaKnown RBP4.52□□□□□ -1.69
CHD9-201ENST00000219084 ACOT2P49753 483 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms