RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 OASLQ15646 514 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 MFSD14CQ5VZR4 134 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 Q9H521 79 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 C15orf41Q9Y2V0 281 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 C2orf71A6NGG8 1288 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 TRPA1O75762 1119 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 ASMTLO95671 621 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 UGP2Q16851 508 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 EMC10Q5UCC4 262 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 IFT43Q96FT9 208 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 ELMO2Q96JJ3 720 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SENP8Q96LD8 212 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 EBNA1BP2Q99848 306 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 CDY2AQ9Y6F7 541 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 CDY1Q9Y6F8 540 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 F9P00740 461 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 CPB1P15086 417 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 GP5P40197 560 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 CASP2P42575 452 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 COPAP53621 1224 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 GPR142Q7Z601 462 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 MYLK4Q86YV6 388 aaPredicted RBP12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 ZBED3Q96IU2 234 aaPredicted RBP12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 BTBD10Q9BSF8 475 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 TXLNGYQ9BZA5 131 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 SDCBP2Q9H190 292 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 DONSONQ9NYP3 566 aa12.71□□□□□ -0.38
TM9SF4-201ENST00000217315 NRCAMQ92823 1304 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 A0A0G2JLL6 359 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 RASSF9O75901 435 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 IVDP26440 423 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 NOS2P35228 1153 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PSEN2P49810 448 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 RHBDF2Q6PJF5 856 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PRRT2Q7Z6L0 340 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 OR52K1Q8NGK4 314 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 SLC44A1Q8WWI5 657 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 NUDT5Q9UKK9 219 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 E9PBE3 544 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PAPSS1O43252 624 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 KLHL41O60662 606 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CNTFP26441 200 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 SLC12A1Q13621 1099 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 POU6F1Q14863 301 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CA9Q16790 459 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 KIF19Q2TAC6 998 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 ADGRD1Q6QNK2 874 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 TMEM130Q8N3G9 435 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CMASQ8NFW8 434 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PCDH19Q8TAB3 1148 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PIP4K2CQ8TBX8 421 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 WNT8BQ93098 351 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 TRIM56Q9BRZ2 755 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 TRIM62Q9BVG3 475 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 XYLT2Q9H1B5 865 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■□□ 16
TM9SF4-201ENST00000217315 NPR3P17342 541 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 TPD52P55327 224 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 C9orf57Q5W0N0 161 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 SCUBE1Q8IWY4 988 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 MCRS1Q96EZ8 462 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 NAF1Q96HR8 494 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 NUF2Q9BZD4 464 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 POPDC2Q9HBU9 364 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 PFDN4Q9NQP4 134 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 ARHGEF38Q9NXL2 777 aa12.7□□□□□ -0.38
TM9SF4-201ENST00000217315 UBA6A0AVT1 1052 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 C2CD2LO14523 706 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms