RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 GCAP28676 217 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 PBX3P40426 434 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 SPARCL1Q14515 664 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 FASTKD3Q14CZ7 662 aaKnown RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 RAB6CQ53S08 254 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 RAB41Q5JT25 222 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 SCYL2Q6P3W7 929 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 C4orf50Q6ZRC1 276 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 ATP11CQ8NB49 1132 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 CMASQ8NFW8 434 aaPredicted RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 RAB6CQ9H0N0 254 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 MARCH5Q9NX47 278 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHGA-201ENST00000216492 HHLA1C9JL84 531 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 PRPSAP2O60256 369 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 FBXO21O94952 628 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 OR4Q2P0C623 313 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 MATKP42679 507 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 PTPN9P43378 593 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 ALDH7A1P49419 539 aaKnown RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 GEMIN4P57678 1058 aaKnown RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 HP1BP3Q5SSJ5 553 aaPredicted RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 GPRIN1Q7Z2K8 1008 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 RFX6Q8HWS3 928 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 DCP1BQ8IZD4 617 aaKnown RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 PYROXD1Q8WU10 500 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 TOP1MTQ969P6 601 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 NCAPGQ9BPX3 1015 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 PAIP2Q9BPZ3 127 aaKnown RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 PITPNM3Q9BZ71 974 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 ULBP1Q9BZM6 244 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 DMAP1Q9NPF5 467 aaPredicted RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 CNGB3Q9NQW8 809 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 SF3B1O75533 1304 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHGA-201ENST00000216492 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 UBOX5O94941 541 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 APOC2P02655 101 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 MRPL58Q14197 206 aaKnown RBP17.56■□□□□ 0.4
CHGA-201ENST00000216492 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 FUT10Q6P4F1 479 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 HSPH1Q92598 858 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 ZCWPW1Q9H0M4 648 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 RXFP1Q9HBX9 757 aa17.56■□□□□ 0.4
CHGA-201ENST00000216492 MCF2LO15068 1137 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 ASMTLO95671 621 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 USP17L7P0C7H9 530 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 TFE3P19532 575 aaPredicted RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 TAC1P20366 129 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 FGFR3P22607 806 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 ELAVL2Q12926 359 aaKnown RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 KLHL38Q2WGJ6 581 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 DCAF6Q58WW2 860 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 RNF43Q68DV7 783 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 CAPN12Q6ZSI9 719 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 MAGEC3Q8TD91 643 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 CENPIQ92674 756 aaPredicted RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 B3GALT6Q96L58 329 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 PEBP4Q96S96 227 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 C11orf84Q9BUA3 381 aaPredicted RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 MAK16Q9BXY0 300 aaKnown RBP17.55■□□□□ 0.4
CHGA-201ENST00000216492 PRKAG3Q9UGI9 489 aa17.55■□□□□ 0.4
CHGA-201ENST00000216492 GOLGA8MH3BSY2 632 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 MGRN1O60291 552 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 ZBED1O96006 694 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 ATP2A2P16615 1042 aaKnown RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 CYP2F1P24903 491 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 GRIK1P39086 918 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 HDAC4P56524 1084 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 DAOAP59103 153 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 EIF3EP60228 445 aaKnown RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 ELF3P78545 371 aaPredicted RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 GALNTL6Q49A17 601 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 EFHC2Q5JST6 749 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 TMEM173Q86WV6 379 aaPredicted RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 NAT8LQ8N9F0 302 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 CPT1BQ92523 772 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 POPDC2Q9HBU9 364 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 SSU72Q9NP77 194 aaKnown RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 SAE1Q9UBE0 346 aaPredicted RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 YJEFN3A6XGL0 299 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 E7ENQ6 273 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 SPAG7O75391 227 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 AMHP03971 560 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 TSHRP16473 764 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 NOS2P35228 1153 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 GDF10P55107 478 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 WDR4P57081 412 aaKnown RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 NFE2Q16621 373 aaPredicted RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 SLC25A52Q3SY17 297 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 RGS9BPQ6ZS82 235 aa17.54■□□□□ 0.4
CHGA-201ENST00000216492 CYP4V2Q6ZWL3 525 aaPredicted RBP17.54■□□□□ 0.4
CHGA-201ENST00000216492 ANKMY2Q8IV38 441 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms