RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TSHZ1Q6ZSZ6 1077 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 DHDDSQ86SQ9 333 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 DEFB107AQ8IZN7 70 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 PYROXD2Q8N2H3 581 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 OR6Y1Q8NGX8 325 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 GDPD5Q8WTR4 605 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 SEPT1Q8WYJ6 367 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.09
USH1C-201ENST00000005226 KCNN1Q92952 543 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 NRDE2Q9H7Z3 1164 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 XPNPEP3Q9NQH7 507 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 TMEM216Q9P0N5 145 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 MAGED2Q9UNF1 606 aaPredicted RBP14.47□□□□□ -0.09
USH1C-201ENST00000005226 PCDHA11Q9Y5I1 949 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 SOWAHBA6NEL2 793 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 ACKR2O00590 384 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 HCRTO43612 131 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 OR6B1O95007 311 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 RTN3O95197 1032 aaPredicted RBP14.47□□□□□ -0.09
USH1C-201ENST00000005226 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 PROZP22891 400 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 MSX2P35548 267 aaPredicted RBP14.47□□□□□ -0.09
USH1C-201ENST00000005226 FAM160B1Q5W0V3 765 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 PDSS2Q86YH6 399 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 TNS4Q8IZW8 715 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 COPS5Q92905 334 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 PPP2R3CQ969Q6 453 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 SORT1Q99523 831 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 A6NJR5 290 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 PRKCGP05129 697 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 VDRP11473 427 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 MGAT1P26572 445 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 COPAP53621 1224 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 HDAC4P56524 1084 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 CUL3Q13618 768 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 PCLAFQ15004 111 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 ACAP1Q15027 740 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 TRIP10Q15642 601 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 LIN52Q52LA3 116 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 PPP1R26Q5T8A7 1209 aaPredicted RBP14.46□□□□□ -0.09
USH1C-201ENST00000005226 SLC9A4Q6AI14 798 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 DLK2Q6UY11 383 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 FRMD7Q6ZUT3 714 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 CMC1Q7Z7K0 106 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 CXorf38Q8TB03 319 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 ZFAND2BQ8WV99 257 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 TFB1MQ8WVM0 346 aaKnown RBP14.46□□□□□ -0.09
USH1C-201ENST00000005226 PGBD4Q96DM1 585 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 RTP4Q96DX8 246 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 LGMNQ99538 433 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 OCEL1Q9H607 264 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 SIP14410 1827 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 BIRC5O15392 142 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 DCXO43602 365 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 PLIN3O60664 434 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 ERVK-10P10266 1014 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 MLH1P40692 756 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 MAGEA3P43357 314 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 PGGT1BP53609 377 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 OAZ1P54368 228 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 ITGA9Q13797 1035 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 TNFAIP1Q13829 316 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 KYAT3Q6YP21 454 aaKnown RBP14.46□□□□□ -0.09
USH1C-201ENST00000005226 AZIN2Q96A70 460 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 SPATA16Q9BXB7 569 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 GBA2Q9HCG7 927 aaPredicted RBP14.46□□□□□ -0.09
USH1C-201ENST00000005226 GPAMQ9HCL2 828 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 MOCS1Q9NZB8 636 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 GJA3Q9Y6H8 435 aa14.46□□□□□ -0.09
USH1C-201ENST00000005226 RLFQ13129 1914 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 E9PBE3 544 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 KLHL41O60662 606 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 RAG1P15918 1043 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 TGM2P21980 687 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 SDC4P31431 198 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 BOLA3Q53S33 107 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 EFCAB12Q6NXP0 572 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 PACS1Q6VY07 963 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 C1orf21Q9H246 121 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 FZD8Q9H461 694 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 IFT122Q9HBG6 1241 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 TMPRSS4Q9NRS4 437 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 STK32BQ9NY57 414 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 CDH22Q9UJ99 828 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 PCDHGB4Q9UN71 923 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 PCDHGB5Q9Y5G0 923 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 TRIP11Q15643 1979 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 ANKRD33BA6NCL7 494 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 FKBP6O75344 327 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 ITGAXP20702 1163 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 CDK7P50613 346 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 ATXN3P54252 364 aaPredicted RBP14.45□□□□□ -0.1
USH1C-201ENST00000005226 MXD4Q14582 209 aaPredicted RBP14.45□□□□□ -0.1
USH1C-201ENST00000005226 PDK2Q15119 407 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 ILDR2Q71H61 639 aa14.45□□□□□ -0.1
USH1C-201ENST00000005226 TTC30AQ86WT1 665 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 547.1 ms