RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Wipf3P0C7L0 485 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Prf1P10820 554 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gabrg2P22723 474 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Adh5P28474 374 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Apobec1P51908 229 aaKnown RBP12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 HccsP53702 272 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slc16a1P53986 493 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Foxp2P58463 714 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cuzd1P70412 606 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Vps45P97390 570 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pou6f1Q07916 301 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ift88Q61371 824 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Msi1Q61474 362 aaKnown RBP12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tpm4Q6IRU2 248 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Polr3gQ6NXY9 223 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Efr3bQ6ZQ18 817 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Olfr855Q7TRF8 312 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 C8bQ8BH35 589 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ankrd52Q8BTI7 1076 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Il33Q8BVZ5 266 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 C5ar2Q8BW93 344 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tp53inp2Q8CFU8 221 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Acsl5Q8JZR0 683 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Macrod1Q922B1 323 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Xpo6Q924Z6 1125 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mrfap1Q9CQL7 125 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Nudt8Q9CR24 210 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cox16Q9CR63 106 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rwdd2aQ9D9S3 292 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sertad3Q9ERC3 197 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ca7Q9ERQ8 264 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 PyglQ9ET01 850 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Elf2Q9JHC9 593 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Hyou1Q9JKR6 999 aaKnown RBP12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gria3Q9Z2W9 888 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Notch4P31695 1964 aa12.7□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 MylkQ6PDN3 1941 aaKnown RBP12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Znf804aA2AKY4 1200 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Daw1D3Z7A5 415 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 4930558K02RikE0CXC6 182 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gm6588E9Q3K0 461 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gm10722F6VLK5 217 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Stx1aO35526 288 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pip4k2aO70172 405 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Becn1O88597 448 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 IghgP01863 330 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gabrb2P63137 512 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tmem26Q3UP23 366 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 KrtdapQ3V2T4 102 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rap1gap2Q5SVL6 712 aaKnown RBP12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Papss1Q60967 624 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Stard3Q61542 446 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sh3gl3Q62421 347 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Myo6Q64331 1265 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Krt39Q6IFX4 482 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Q6PD19 689 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tdpoz2Q717B2 364 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slc39a4Q78IQ7 660 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Kctd13Q8BGV7 329 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ttc27Q8CD92 847 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Znf628Q8CJ78 1038 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 PdxkQ8K183 312 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ddx1Q91VR5 740 aaKnown RBP12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tgs1Q923W1 853 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Prc1Q99K43 603 aaKnown RBP12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 PigxQ99LV7 254 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sytl2Q99N50 950 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gtf2ird2Q99NI3 936 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 MtapQ9CQ65 283 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tpd52l2Q9CYZ2 220 aaKnown RBP12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rasgef1cQ9D300 466 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 LrgukQ9D5S7 820 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 PdiltQ9DAN1 588 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Htra2Q9JIY5 458 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Akip1Q9JJR5 212 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mapk13Q9Z1B7 366 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cfap54Q8C6S9 3106 aa12.69□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Col9a3A2ACT7 680 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Fam43bA2AM80 330 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gm10719E9Q7T3 227 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Olfr731F8VQB9 326 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Nr3c1P06537 783 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Igfbp2P47877 305 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tpm2P58774 284 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 CtrcQ3SYP2 268 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rnf215Q5SPX3 379 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 HarsQ61035 509 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Lsm8Q6ZWM4 96 aaKnown RBP12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Olfr213Q7TS32 327 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Adipor2Q8BQS5 386 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tmem74Q8BQU7 305 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Nup54Q8BTS4 510 aaKnown RBP12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slc24a5Q8C261 501 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Recql5Q8VID5 982 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tmem168Q91VX9 697 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pcdha3Q91Y16 942 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slc12a6Q924N4 1150 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pdxdc1Q99K01 787 aaKnown RBP12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Erp44Q9D1Q6 406 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 4931423N10RikQ9D4J9 382 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms