RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pnldc1B2RXZ1 531 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm5926E9PWJ8 236 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm21293E9Q4G9 266 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Speer4cG3UXD1 256 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Speer4eK7N6S8 255 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm3182K7N6T8 263 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm17019K7N6W5 255 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pik3cdO35904 1043 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mcpt1P11034 246 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 RarbP22605 482 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Aldh1a1P24549 501 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Celf1P28659 486 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kcnj2P35561 428 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Treml4Q3LRV9 263 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tgtp2Q3T9E4 415 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Prickle1Q3U5C7 832 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pid1Q3UBG2 217 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zfp956Q3UZY6 572 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Atp13a4Q5XF90 1193 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tgtp1Q62293 415 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sp140Q6NSQ5 534 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Galnt7Q80VA0 657 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SvopQ8BFT9 548 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dupd1Q8BK84 215 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 C1qtnf7Q8BVD7 289 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Calhm6Q8C9E8 313 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rab36Q8CAM5 267 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fem1cQ8CEF1 617 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Scyl2Q8CFE4 930 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Eif3lQ8QZY1 564 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr1502Q8VG66 316 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cavin3Q91VJ2 260 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tlr3Q99MB1 905 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vps28Q9D1C8 221 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cthrc1Q9D1D6 245 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmbim6Q9D2C7 237 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dnajb4Q9D832 337 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 ParvaQ9EPC1 372 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Anxa9Q9JHQ0 345 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gadd45gQ9Z111 159 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm3752A6NAT4 150 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AK157302I3ITR1 129 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Shoc2O88520 582 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 En1P09065 401 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Spp1P10923 294 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ifrd1P19182 449 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fmr1P35922 614 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rbp3P49194 1234 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cyp2e1Q05421 493 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pou6f1Q07916 301 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tigd2Q0VBL1 525 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 4930480E11RikQ0VG34 394 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zc3h15Q3TIV5 426 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc17a7Q3TXX4 560 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cyp2c29Q64458 490 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rab3ipQ68EF0 428 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rasgrp3Q6NZH9 691 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Chst10Q6PGK7 356 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dlg1Q811D0 905 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gjc2Q8BQU6 440 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 4930572O03RikQ8C5Y0 211 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc30a5Q8R4H9 761 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Oas3Q8VI93 1138 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pcdhb10Q91VE5 797 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Xpo5Q924C1 1204 aaKnown RBP10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 MvdQ99JF5 401 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Isca1Q9D924 129 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmem8aQ9ESN3 769 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AnkhQ9JHZ2 492 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 XkQ9QXY7 446 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PrebQ9WUQ2 417 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ttc6G3UYY4 1857 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm45261A0A1B0GSP6 197 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cldn24D3YXJ9 220 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kbtbd6E9PYD7 486 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kbtbd7G5E8C2 690 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm6351K9J7D1 481 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Parp3Q3ULW8 533 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 BC051142Q3V0M8 400 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nxpe4Q52KP5 543 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ppp1r13lQ5I1X5 824 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CcncQ62447 283 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Q80ZQ3 298 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc17a8Q8BFU8 601 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Klhl38Q8BSF5 581 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 TiparpQ8C1B2 657 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 D630039A03RikQ8K0M7 236 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 OscarQ8VBT3 265 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr1361Q8VFH0 317 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Clstn3Q99JH7 956 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pkp2Q9CQ73 795 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Lman1Q9D0F3 517 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gbe1Q9D6Y9 702 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmem79Q9D709 391 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Scyl1Q9EQC5 806 aaKnown RBP9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ing2Q9ESK4 281 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tfr2Q9JKX3 798 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mroh6V9GX81 722 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Siglec1Q62230 1695 aa9.99□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Lrp5Q91VN0 1614 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms