RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Wdr59Q8C0M0 992 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Plekhh3Q8VCE9 796 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Snx9Q91VH2 595 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Mgea5Q9EQQ9 916 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Ccdc86Q9JJ89 426 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 PnkpQ9JLV6 522 aaKnown RBP16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Copg2Q9QXK3 871 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Gm5538W4VSP6 401 aa16.4■□□□□ 0.22
Trim50-201ENSMUST00000065785 Adamts9E9PUN6 1931 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Zfp384E9Q1A5 584 aaKnown RBP16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Gm21293E9Q4G9 266 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ptprn2P80560 1001 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 InhbaQ04998 424 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Pik3r6Q3U6Q4 756 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 TceancQ3US16 359 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Spag6Q3V0U9 509 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Acbd5Q5XG73 508 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 SkiQ60698 725 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Slc20a1Q61609 681 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 DazlQ64368 298 aaKnown RBP16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Tmem220Q8BP07 167 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Castor2Q8CAB8 329 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Vps37bQ8R0J7 285 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Olfr532Q8VGT4 309 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Lpin1Q91ZP3 924 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ophn1Q99J31 802 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Mrps17Q9CQE3 120 aaKnown RBP16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Timp4Q9JHB3 224 aa16.39■□□□□ 0.21
Trim50-201ENSMUST00000065785 Gm5485A0A1D5RM98 91 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 9330159F19RikD3Z623 648 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Serpine3E9Q6A2 401 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Il12aP43431 215 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Fmo3P97501 534 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Pecam1Q08481 727 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Slc17a7Q3TXX4 560 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Slc9b2Q5BKR2 547 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Fbxw11Q5SRY7 542 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Spa17Q62252 149 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 MyorgQ69ZQ1 716 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ankzf1Q80UU1 748 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Clec2eQ80XD9 204 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ccdc68Q8BVC4 333 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Slc39a13Q8BZH0 361 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Fbxl13Q8CDU4 790 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Akr1c14Q91WT7 323 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Sh3d19Q91X43 789 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Lrp8Q924X6 996 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 NonoQ99K48 473 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Arl2Q9D0J4 184 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Tssk3Q9D2E1 268 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ddx21Q9JIK5 851 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Rtl9Q32KG4 1339 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Gm36028A0A0U1RPM1 299 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Fam171a2A2A699 822 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Zfp839E9PUU5 921 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Vmn1r39G3UWE6 305 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Cacna2d1O08532 1103 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 PigrO70570 771 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Pde6bP23440 856 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Sycp3P70281 254 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Sparcl1P70663 650 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 MylpfP97457 169 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Grid1Q61627 1009 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Ripor1Q68FE6 1223 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Dnajc8Q6NZB0 253 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Tbc1d10bQ8BHL3 798 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 NcaphQ8C156 731 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Rfx6Q8C7R7 927 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Zfp449Q8CB76 518 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Prrg2Q8R182 198 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Angel1Q8VCU0 667 aa16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Pqbp1Q91VJ5 263 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 Alg13Q9D8C3 1166 aaKnown RBP16.38■□□□□ 0.21
Trim50-201ENSMUST00000065785 March10E9PX79 788 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 4930426L09RikE9Q0N7 123 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Spin2fJ3QPU0 254 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Gm3739L7N296 216 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Srpk1O70551 648 aaKnown RBP16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Il3P01586 166 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 CcnoP0C242 352 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 B3gat3P58158 335 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 WasP70315 520 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Serpina6Q06770 397 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Cpne7Q0VE82 557 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Gm11487Q5RIS0 354 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Mef2dQ63943 514 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Prdm4Q80V63 803 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Trim62Q80V85 475 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Dnajb13Q80Y75 316 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Iars2Q8BIJ6 1012 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Serpina3bQ8BYY9 420 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Tasp1Q8R1G1 420 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Lrrc8cQ8R502 803 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Zfp617Q91WM0 559 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Slc13a3Q91Y63 600 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Spc24Q9D083 201 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Krt20Q9D312 431 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Rmdn1Q9DCV4 305 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Kdelc1Q9JHP7 502 aa16.37■□□□□ 0.21
Trim50-201ENSMUST00000065785 Acox2Q9QXD1 681 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms