RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Spata31E9QAF0 1014 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Crabp2P22935 138 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 NogP97466 232 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Grid2ipQ0QWG9 1203 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Olfr389Q7TRX7 312 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Mtss1Q8R1S4 759 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Glra3Q91XP5 464 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Homer3Q99JP6 356 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Q9CQC3 228 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Kdm8Q9CXT6 414 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Rrp15Q9CYX7 281 aaKnown RBP10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Akr1c12Q9JLI0 323 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Cpsf3Q9QXK7 684 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gm1141B9EJU1 475 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Trim5E9PV98 497 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PtgisO35074 501 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gjb3P28231 270 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Krt6aP50446 553 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Pms2P54279 859 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Mfhas1Q3V1N1 1048 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Wscd1Q80XH4 572 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Pan2Q8BGF7 1200 aaKnown RBP10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Exoc3l1Q8BI71 739 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Cpsf7Q8BTV2 471 aaKnown RBP10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Afap1l1Q8BZI0 768 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Subh2bvQ9D9Z7 123 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Apobec2Q9WV35 224 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Myh9Q8VDD5 1960 aaKnown RBP10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gm12394A2AKP6 982 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Cyp2a22B2RXZ2 492 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ifi206G3UZV2 921 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Klc2O88448 599 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Rab17P35292 214 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Irf6P97431 467 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Lrrn4clQ3TYX2 239 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Otol1Q4ZJM7 482 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Arhgap20Q6IFT4 1182 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Iars2Q8BIJ6 1012 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Mtrf1lQ8BJU9 373 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fbxl5Q8C2S5 690 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Hdhd5Q91WM2 419 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 TfQ921I1 697 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Trps1Q925H1 1281 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fam162aQ9D6U8 155 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tmbim4Q9DA39 238 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Prg3Q9JL95 222 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 LipaQ9Z0M5 397 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Kcnd2Q9Z0V2 630 aa10□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 1700024B05RikE9Q6D7 167 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 BhmtO35490 407 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Hoxc6P10629 235 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 HalP35492 657 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Vps4bP46467 444 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 GckP52792 465 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 St3gal1P54751 337 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Serpina6Q06770 397 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Papss1Q60967 624 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Armcx2Q6A058 784 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fnip2Q80TD3 1108 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dnajc6Q80TZ3 938 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Lrrc24Q8BHA1 521 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 GancQ8BVW0 898 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Prpf39Q8K2Z2 665 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ero1bQ8R2E9 467 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dok4Q99KE3 325 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tas1r1Q99PG6 842 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ccdc130Q9D516 385 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Igdcc4Q9EQS9 1252 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tspan3Q9QY33 253 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Angptl2Q9R045 493 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Slc4a9E9PUP3 929 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CidebO70303 219 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Nr3c1P06537 783 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Cxcr2P35343 359 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Sparcl1P70663 650 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fmo3P97501 534 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fam160a1Q505K2 1081 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Q8BGA7 448 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gabra5Q8BHJ7 463 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ppp4r4Q8C0Y0 875 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gtse1Q8R080 741 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dhx36Q8VHK9 1001 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 MyocdQ8VIM5 935 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Nmd3Q99L48 503 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ndufa10Q99LC3 355 aaKnown RBP9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Commd8Q9CZG3 183 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dnajc18Q9CZJ9 357 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 4930513O06RikQ9D549 161 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PllpQ9DCU2 182 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Olfr711Q9EPG2 314 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Akap5D3YVF0 745 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Hsd17b14E9Q3D4 273 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dnase1l3O55070 310 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CfhP06909 1234 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fgfr1P16092 822 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Arf4P61750 180 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Arl14Q3SXC5 192 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Gpd1lQ3ULJ0 351 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Arl13bQ640N2 427 aa9.99□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 MregQ6NVG5 214 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms