RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Tas2r125Q7M710 311 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 EmsyQ8BMB0 1264 aaKnown RBP16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Zfp263Q8CF60 680 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Mkl1Q8K4J6 964 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 TgdsQ8VDR7 355 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Cep83Q9D5R3 692 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Slc29a1Q9JIM1 460 aa16.5■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Fbxl18E9PYR1 771 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Zfp358E9Q8M1 571 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Tekt5G5E8A8 557 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 CflarO35732 481 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Krt10P02535 570 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pou2f2Q00196 463 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Nek10Q3UGM2 1111 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Tab3Q571K4 716 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 CybbQ61093 570 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Grid2Q61625 1007 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Armcx2Q6A058 784 aaKnown RBP16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Rad54bQ6PFE3 886 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Olfr1105Q7TR58 312 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Gm15262A0A140LIQ5 728 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ism2D3Z6A3 493 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Stmn2P55821 179 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Cyth2P63034 400 aaKnown RBP16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Msx2Q03358 267 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Kcnc2Q14B80 642 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pyroxd1Q3TMV7 498 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Lrrn4clQ3TYX2 239 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Fam8a1Q3URQ4 399 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 CochQ62507 552 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Q8BGA7 448 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pan2Q8BGF7 1200 aaKnown RBP16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Il17reQ8BH06 637 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Fzd10Q8BKG4 582 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Atg16l1Q8C0J2 607 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Traf7Q922B6 594 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Unc45aQ99KD5 944 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ror2Q9Z138 944 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Galnt4O08832 578 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 OsbpQ3B7Z2 805 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Nab1Q61122 486 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Slc20a1Q61609 681 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Jade1Q6ZPI0 834 aaKnown RBP16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Cdkn3Q810P3 211 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Abhd8Q8R0P8 439 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Sytl1Q99N80 567 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 AadacQ99PG0 398 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Mrps17Q9CQE3 120 aaKnown RBP16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Brca1P48754 1812 aa16.49■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Bclaf3A2AG58 752 aaKnown RBP16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Oaz1P54369 227 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Serping1P97290 504 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Gm1587Q3UT80 123 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ampd1Q3V1D3 745 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Syce2Q505B8 171 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 PrkciQ62074 595 aaKnown RBP16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Htr1aQ64264 421 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Kctd12Q6WVG3 327 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 SgczQ8BX51 311 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Stx18Q8VDS8 334 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pcdhb6Q91XZ4 772 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ier5lQ99J55 406 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 PllpQ9DCU2 182 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Arhgef26D3YYY8 869 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 C87414E9PWI7 475 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Gm3187M0QWW3 260 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Syngr1O55100 234 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Sypl2O89104 264 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 RnaselQ05921 735 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Gpd1lQ3ULJ0 351 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 B3gnt3Q5JCS9 372 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ino80dQ66JY2 873 aaKnown RBP16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ankrd52Q8BTI7 1076 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Fam204aQ8C6C7 236 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ube2q2Q8K2Z8 378 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Vopp1Q8R1C3 172 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Zcchc18Q8VD24 393 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Rnf138rt1Q9D9M9 248 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Tekt1Q9DAJ2 418 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Rassf7Q9DD19 359 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Trpm5Q9JJH7 1158 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 QkiQ9QYS9 341 aaKnown RBP16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Tle6Q9WVB3 581 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Btbd19S4R1I0 287 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Lama3Q61789 3330 aa16.48■□□□□ 0.23
Ckap4-201ENSMUST00000053871 XntrpcF8VQM8 1264 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Fignl2J3QK54 644 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Rdh7O88451 316 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 TnfP06804 235 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Caprin2Q05A80 1031 aaKnown RBP16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Serpina6Q06770 397 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 EfsQ64355 560 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Znf821Q6PD05 413 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Rad9bQ6WBX7 403 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Olfr449Q8VGW8 311 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Ubap2Q91VX2 1132 aaKnown RBP16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pcdhb2Q91Y00 799 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Pih1d1Q9CQJ2 290 aa16.47■□□□□ 0.23
Ckap4-201ENSMUST00000053871 Nme7Q9QXL8 395 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms