RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Depdc5P61460 1591 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Spag17Q5S003 2320 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Gm3278L7N2D2 218 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Kpna4O35343 521 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cyp2c67Q569X9 491 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Usf2Q64705 346 aaKnown RBP14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 SyncripQ7TMK9 623 aaKnown RBP14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Fbxo38Q8BMI0 1194 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ube2q2Q8K2Z8 378 aa14.27□□□□□ -0.12
Col5a1-201ENSMUST00000028280 4933408B17RikG3X9B4 273 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Smcr8Q3UMB5 935 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gpt2Q8BGT5 522 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Klhl26Q8BGY4 606 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 ClyblQ8R4N0 338 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Sae1Q9R1T2 350 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Flt4P35917 1363 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Adam7O35227 789 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Phkg1P07934 388 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Surf2P09926 257 aaKnown RBP14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ddx3xQ62167 662 aaKnown RBP14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Plk4Q64702 925 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfr119Q7TRJ5 321 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ms4a5Q810P8 197 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Adgra1Q8C4G9 578 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Elovl6Q920L5 267 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 GOLGA7BQ9D428 167 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Trpm1Q2TV84 1622 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Adam15O88839 864 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zdhhc9P59268 364 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mcm9Q2KHI9 1134 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmem237Q3V0J1 427 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pcdhgc5Q91XW9 944 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Bcl2l12Q9D3J3 255 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Sars2Q9JJL8 518 aa14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ddx20Q9JJY4 825 aaKnown RBP14.27□□□□□ -0.13
Col5a1-201ENSMUST00000028280 CtshP49935 333 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Clca4aQ6Q473 924 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 SvopQ8BFT9 548 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ttc16Q8C1F5 767 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gfm2Q8R2Q4 779 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Scube2Q9JJS0 997 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 AspgA0JNU3 564 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Xlr5bA2BI50 236 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfr67F8VPJ8 320 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rad51Q08297 339 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Peg10Q7TN75 958 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 C8aQ8K182 587 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ddx50Q99MJ9 734 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Txndc12Q9CQU0 170 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mgrn1Q9D074 532 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gcnt4E9Q649 455 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Il12bP43432 335 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Taf13P61216 124 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Lrig3Q6P1C6 1117 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Lin7aQ8JZS0 233 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ubqln1Q8R317 582 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Chid1Q922Q9 393 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 St7Q99M96 577 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fxr2Q9WVR4 673 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Myh2G3UW82 1942 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Myh1Q5SX40 1942 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Msh3P13705 1091 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc1a2P43006 572 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cyp4f37Q3V1F1 546 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rhox12Q4TU81 186 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fndc11Q80WB0 326 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Samd4bQ80XS6 687 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gsdmc3Q8CB12 480 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Colgalt1Q8K297 617 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nsmce2Q91VT1 247 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cab39lQ9DB16 337 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 PaicsQ9DCL9 425 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fam172aQ3TNH5 417 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Trmt1Q3TX08 663 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Eef1akmt2Q9D853 244 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tnfaip8l2Q9D8Y7 184 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ddi1Q9DAF3 408 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Morc1Q9WVL5 950 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Sept5Q9Z2Q6 369 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zbtb11G5E8B9 1050 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gria1P23818 907 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Polr1cP52432 346 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmc8Q7TN58 722 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Psmd11Q8BG32 422 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gcfc2Q8BKT3 769 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ciapin1Q8WTY4 309 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Znf608Q56A10 1511 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Il1aP01582 270 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Atp5bP56480 529 aaKnown RBP14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fam83fQ3UKU4 495 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfml2aQ8BHP7 681 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ing4Q8C0D7 249 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Q8K2W9 541 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 2610042L04RikQ9D073 150 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Abhd2Q9QXM0 425 aa14.26□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tp53P02340 387 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 AprtP08030 180 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 ProcP33587 460 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tnni3kQ5GIG6 834 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 OplahQ8K010 1288 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms