RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CLEC4CQ8WTT0 213 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 NT5C1AQ9BXI3 368 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 PDGFCQ9NRA1 345 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF212Q9UDV6 495 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 MEI4A8MW99 385 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 ARF4P18085 180 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 YY1P25490 414 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 GMPRP36959 345 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 PKDCCQ504Y2 493 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 KCNT2Q6UVM3 1135 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 DNAJC14Q6Y2X3 702 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 ACOT1Q86TX2 421 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 LRRC39Q96DD0 335 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 APOL6Q9BWW8 343 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 MOCS1Q9NZB8 636 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 EMCNQ9ULC0 261 aa14.29□□□□□ -0.12
PHGDH-233ENST00000642021 TNS1Q9HBL0 1735 aaKnown RBP14.29□□□□□ -0.12
PHGDH-233ENST00000642021 SDR42E2A6NKP2 422 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SPECC1L-ADORA2AF8WAN1 911 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PPEF2O14830 753 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 NPTXRO95502 500 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 C22orf31O95567 290 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 C6orf222P0C671 652 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 L1CAMP32004 1257 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 RPL10AP62906 217 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SLC6A3Q01959 620 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 VGLL4Q14135 290 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 FASTKD1Q53R41 847 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 GATA6Q92908 595 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 MTBPQ96DY7 904 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ASB7Q9H672 318 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PRMT7Q9NVM4 692 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 MTMR10Q9NXD2 777 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 DPP3Q9NY33 737 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PCDHA11Q9Y5I1 949 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 WDR27A2RRH5 827 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 F8W8V4 182 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 DPYSL4O14531 572 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 HCRTO43612 131 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 GCATO75600 419 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ALDOAP04075 364 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 MCF2P10911 925 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 P4HA1P13674 534 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ANPEPP15144 967 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 KCNA4P22459 653 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 CPOXP36551 454 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ACTR3P61158 418 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 TUBB3Q13509 450 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 NOL9Q5SY16 702 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 FOXB2Q5VYV0 432 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ARHGAP24Q8N264 748 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 DEPDC1BQ8WUY9 529 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 TTC1Q99614 292 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF670Q9BS34 389 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 DHX35Q9H5Z1 703 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 HESX1Q9UBX0 185 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ASB3Q9Y575 518 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 EVPLQ92817 2033 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 MAP3K7O43318 606 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 USP1O94782 785 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 VTNP04004 478 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SERPINA6P08185 405 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 IRX1P78414 480 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SMYD5Q6GMV2 418 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 ARMCX6Q7L4S7 300 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 NET1Q7Z628 596 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 TMEM110Q86TL2 294 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 MYLK4Q86YV6 388 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PPFIBP2Q8ND30 876 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SLC35F5Q8WV83 523 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 IFT43Q96FT9 208 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 DDX50Q9BQ39 737 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 SLC4A5Q9BY07 1137 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 XAB2Q9HCS7 855 aaKnown RBP14.28□□□□□ -0.12
PHGDH-233ENST00000642021 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 THAP1Q9NVV9 213 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 IL1RAPL1Q9NZN1 696 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PPM1HQ9ULR3 514 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PSAT1Q9Y617 370 aa14.28□□□□□ -0.12
PHGDH-233ENST00000642021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.12
PHGDH-233ENST00000642021 FZD9O00144 591 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 MDM4O15151 490 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 BIRC5O15392 142 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 HBP1O60381 514 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 INSRRP14616 1297 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 ARRB2P32121 409 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 WASHC5Q12768 1159 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 MTA1Q13330 715 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms