RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DDX42Q86XP3 938 aaKnown RBP eCLIP10.08□□□□□ -0.83e-6■■■□□ 16.1
PHGDH-215ENST00000641371 LRRC49Q8IUZ0 686 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PPIL6Q8IXY8 311 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 ZCCHC9Q8N567 271 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 LZTR1Q8N653 840 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 DIS3LQ8TF46 1054 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 KCTD15Q96SI1 283 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 SH3GL2Q99962 352 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 MTIF3Q9H2K0 278 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 CWH43Q9H720 699 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 WDR6Q9NNW5 1121 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 AFF4Q9UHB7 1163 aaKnown RBP10.08□□□□□ -0.8
PHGDH-215ENST00000641371 NAALADL1Q9UQQ1 740 aa10.08□□□□□ -0.8
PHGDH-215ENST00000641371 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 HMGB1P1B2RPK0 211 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 EEF2KO00418 725 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FGF10O15520 208 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 URODP06132 367 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FYNP06241 537 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 IVLP07476 585 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FAM153BP0C7A2 387 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 IL4RP24394 825 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ATP5DP30049 168 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 HSD17B3P37058 310 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 GLUD2P49448 558 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CDR1P51861 262 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 LBX1P52954 281 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ITGA8P53708 1063 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 TPI1P60174 286 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 WDR5P61964 334 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 COG7P83436 770 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CDK16Q00536 496 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 DSG1Q02413 1049 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ADCY2Q08462 1091 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 GPS1Q13098 491 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 NME3Q13232 169 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PLD1Q13393 1074 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 BTG3Q14201 252 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PSMD5Q16401 504 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ZC3H12AQ5D1E8 599 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 OTUD1Q5VV17 481 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 SYPL2Q5VXT5 272 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 HEATR6Q6AI08 1181 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PSRC1Q6PGN9 363 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CENPUQ71F23 418 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ANKS1BQ7Z6G8 1248 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 DDX53Q86TM3 631 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CCDC185Q8N715 623 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PQLC3Q8N755 202 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 DQX1Q8TE96 717 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 UBLCP1Q8WVY7 318 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 RNF34Q969K3 372 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FBXO32Q969P5 355 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ACSF2Q96CM8 615 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PPP1R2P1Q96PQ5 205 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 QKIQ96PU8 341 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 TMEM209Q96SK2 561 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CCDC77Q9BR77 488 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 TMEM109Q9BVC6 243 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 TTLL2Q9BWV7 592 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ROPN1BQ9BZX4 212 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CATSPERBQ9H7T0 1116 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ROPN1Q9HAT0 212 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PIGVQ9NUD9 493 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 MTMR10Q9NXD2 777 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ARHGEF38Q9NXL2 777 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 CWC15Q9P013 229 aaKnown RBP10.07□□□□□ -0.8
PHGDH-215ENST00000641371 FAM153AQ9UHL3 310 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 TLR6Q9Y2C9 796 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 RWDD3Q9Y3V2 267 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 PCDHB12Q9Y5F1 795 aa10.07□□□□□ -0.8
PHGDH-215ENST00000641371 ZNF638Q14966 1978 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 DNAH12Q6ZR08 3092 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 CENPFP49454 3210 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 C5orf60A6NFR6 353 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 CHADO15335 359 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 UPP2O95045 317 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 IFNB1P01574 187 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 APOEP02649 317 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ABHD2P08910 425 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 MYZAPP0CAP1 466 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 CSH1P0DML2 217 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 CSH2P0DML3 217 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 ATP2A2P16615 1042 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 OAS2P29728 719 aaKnown RBP10.06□□□□□ -0.8
PHGDH-215ENST00000641371 FDFT1P37268 417 aa10.06□□□□□ -0.8
PHGDH-215ENST00000641371 GATMP50440 423 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms