RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 FAM13CQ8NE31 585 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 MCUQ8NE86 351 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 SLC13A1Q9BZW2 595 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 TRIM6Q9C030 488 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-225ENST00000640209 EBF2Q9HAK2 575 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 FLRT1Q9NZU1 646 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 HEY2Q9UBP5 337 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 UBQLN1Q9UMX0 589 aaKnown RBP9.68□□□□□ -0.86
NECAP1-225ENST00000640209 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
NECAP1-225ENST00000640209 CCDC195A0A1B0GUA6 201 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 FAM237BA0A1B0GVD1 139 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 COPEO14579 308 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 MFSD11O43934 449 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SPAG6O75602 509 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 DGKIO75912 1065 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 AMHP03971 560 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 RPSAP08865 295 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SNRPAP09012 282 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 DLDP09622 509 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 OLIG2Q13516 323 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SNX17Q15036 470 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 MROH9Q5TGP6 573 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 HFE2Q6ZVN8 426 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PAQR9Q6ZVX9 377 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 CTU1Q7Z7A3 348 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PIGZQ86VD9 579 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ZDHHC17Q8IUH5 632 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 VPS52Q8N1B4 723 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 RNF169Q8NCN4 708 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ARMC2Q8NEN0 867 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 OLFM3Q96PB7 478 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 EBNA1BP2Q99848 306 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 TMEM120AQ9BXJ8 343 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ABHD16BQ9H3Z7 469 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 FZD10Q9ULW2 581 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PLLPQ9Y342 182 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PDCD11Q14690 1871 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 WDR27A2RRH5 827 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 MBLAC1A4D2B0 266 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 RRN3P2A6NIE6 340 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 FAM159BA6NKW6 160 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ZNF487B1APH4 448 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 F2P00734 622 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 EZRP15311 586 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SERPINB3P29508 390 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 GMPRP36959 345 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SULT1E1P49888 294 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ADIGQ0VDE8 80 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PARP6Q2NL67 630 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SYPL2Q5VXT5 272 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 OLFML2BQ68BL8 750 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 IQSEC1Q6DN90 963 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 LIMS2Q7Z4I7 341 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SMG8Q8ND04 991 aaKnown RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 TTC8Q8TAM2 541 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 GTF3C2Q8WUA4 911 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SKA1Q96BD8 255 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 C20orf27Q9GZN8 174 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 SNX25Q9H3E2 840 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ARHGEF4Q9NR80 690 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.67□□□□□ -0.86
NECAP1-225ENST00000640209 IL1RAPL1Q9NZN1 696 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 GTF2IRD1Q9UHL9 959 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 ZNF180Q9UJW8 692 aa9.67□□□□□ -0.86
NECAP1-225ENST00000640209 TRDMT1O14717 391 aaKnown RBP9.66□□□□□ -0.86
NECAP1-225ENST00000640209 DIAPH2O60879 1101 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 F7P08709 466 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-225ENST00000640209 TPSB2P20231 275 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 CCND1P24385 295 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 MAP2K2P36507 400 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 CCNFP41002 786 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ARFIP2P53365 341 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ADAM17P78536 824 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 BEX3Q00994 111 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 SEMA5AQ13591 1074 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 TPSAB1Q15661 275 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ANKRD20A2Q5SQ80 823 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ANKRD20A1Q5TYW2 823 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ANKRD20A3Q5VUR7 823 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 RFWD3Q6PCD5 774 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 PLEKHH3Q7Z736 793 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ADGRF2Q8IZF7 708 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 NSMCE1Q8WV22 266 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 FAM149B1Q96BN6 582 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 PTCD3Q96EY7 689 aaKnown RBP9.66□□□□□ -0.86
NECAP1-225ENST00000640209 TRIM55Q9BYV6 548 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 ANLNQ9NQW6 1124 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 PCMTD2Q9NV79 361 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 GDAP2Q9NXN4 497 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 GNEQ9Y223 722 aaKnown RBP9.66□□□□□ -0.86
NECAP1-225ENST00000640209 PCDHA11Q9Y5I1 949 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 SMIM35A0A1B0GVV1 85 aa9.66□□□□□ -0.86
NECAP1-225ENST00000640209 I6L893 689 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-225ENST00000640209 PEX11AO75192 247 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms