RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 FGBP02675 491 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 RARGP13631 454 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 PTPN7P35236 360 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 MGAT5Q09328 741 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 FNDC3BQ53EP0 1204 aaKnown RBP11.34□□□□□ -0.59
SCN1B-208ENST00000640135 LRRC8EQ6NSJ5 796 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 C16orf89Q6UX73 402 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 ANO5Q75V66 913 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 NT5DC3Q86UY8 548 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 COLGALT1Q8NBJ5 622 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 CD99L2Q8TCZ2 262 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 GAS2L1Q99501 681 aaPredicted RBP11.34□□□□□ -0.59
SCN1B-208ENST00000640135 ILKAPQ9H0C8 392 aaPredicted RBP11.34□□□□□ -0.59
SCN1B-208ENST00000640135 PABPC3Q9H361 631 aaKnown RBP11.34□□□□□ -0.59
SCN1B-208ENST00000640135 SMYD3Q9H7B4 428 aa11.34□□□□□ -0.59
SCN1B-208ENST00000640135 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
SCN1B-208ENST00000640135 SLCO1B7G3V0H7 640 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 FZD9O00144 591 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 FAM107AO95990 144 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 PLEKP08567 350 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SKOR1P84550 965 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ARMC12Q5T9G4 340 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 AHSPQ9NZD4 102 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ACOT9Q9Y305 439 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SLIT2O94813 1529 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 C1QTNF3-AMACRE9PGA6 284 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 H3BMM5 538 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 GLUD1P00367 558 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HALP42357 657 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 PEX6Q13608 980 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 CUL3Q13618 768 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HIC1Q14526 733 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HYIQ5T013 277 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 PALB2Q86YC2 1186 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 B3GALNT2Q8NCR0 500 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HTR3CQ8WXA8 447 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SPATA17Q96L03 361 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 POLR1EQ9GZS1 481 aaKnown RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 FAM153AQ9UHL3 310 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 CDH8P55286 799 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 MPP3Q13368 585 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 MROH9Q5TGP6 573 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 LRRC38Q5VT99 294 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 C4orf33Q8N1A6 199 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 STK40Q8N2I9 435 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HIPK4Q8NE63 616 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 FAM118BQ9BPY3 351 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SLC24A2Q9UI40 661 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 VANGL2Q9ULK5 521 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ARHGAP26Q9UNA1 814 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 OR56A5P0C7T3 313 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ERVK-10P10266 1014 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 CES1P23141 567 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SNRPD1P62314 119 aaKnown RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 BMT2Q1RMZ1 405 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 USP45Q70EL2 814 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 LPCAT1Q8NF37 534 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
SCN1B-208ENST00000640135 NLNQ9BYT8 704 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
SCN1B-208ENST00000640135 ARIH2O95376 493 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 BMP10O95393 424 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 CYP2A7P20853 494 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 GLUD2P49448 558 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 PLCL1Q15111 1095 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
SCN1B-208ENST00000640135 VSTM1Q6UX27 236 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 TRIML2Q8N7C3 387 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
SCN1B-208ENST00000640135 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 EIF2AQ9BY44 585 aaKnown RBP11.32□□□□□ -0.6
SCN1B-208ENST00000640135 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 NOP53Q9NZM5 478 aaKnown RBP11.32□□□□□ -0.6
SCN1B-208ENST00000640135 RAB23Q9ULC3 237 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 NFAT5O94916 1531 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 SIGLEC16A6NMB1 481 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 ATP9AO75110 1047 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 CDK16Q00536 496 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 PRKAA1Q13131 559 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 IRAK1BP1Q5VVH5 260 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 FAM46CQ5VWP2 391 aa11.32□□□□□ -0.6
SCN1B-208ENST00000640135 ICE2Q659A1 982 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms