RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FOXR2Q6PJQ5 311 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 RRAGAQ7L523 313 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 TSTD1Q8NFU3 115 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 BHMTQ93088 406 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 ACDQ96AP0 544 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PIWIL1Q96J94 861 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 LMLNQ96KR4 655 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 CEP63Q96MT8 703 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 GABRG3Q99928 467 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 IMPG2Q9BZV3 1241 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 TJP2Q9UDY2 1190 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 SFMBT1Q9UHJ3 866 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 CTNND2Q9UQB3 1225 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 RAD54BQ9Y620 910 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 EPG5Q9HCE0 2579 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 CHD8Q9HCK8 2581 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 MUC22E2RYF6 1773 aaPredicted RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 MAP1BP46821 2468 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PCNX2A6NKB5 2137 aa8.21□□□□□ -1.09
PNKP-229ENST00000637897 CFAP47Q6ZTR5 3102 aa8.21□□□□□ -1.09
PNKP-229ENST00000637897 PCDH15Q96QU1 1955 aa8.21□□□□□ -1.09
PNKP-229ENST00000637897 CKAP5Q14008 2032 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 TBC1D3BA6NDS4 549 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 PRR5-ARHGAP8B1AHC4 643 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 MSI1O43347 362 aaKnown RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 ZBED1O96006 694 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 SERPINC1P01008 464 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 IGLV3-27P01718 113 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 HMBSP08397 361 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 VDRP11473 427 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 CORO1AP31146 461 aaKnown RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 RGS7P49802 495 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 MFAP3P55082 362 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 UBASH3AP57075 661 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 DAOAP59103 153 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 YWHAGP61981 247 aaKnown RBP eCLIP8.21□□□□□ -1.1
PNKP-229ENST00000637897 ARHGAP8P85298 464 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 ADIGQ0VDE8 80 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 C10orf76Q5T2E6 689 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 TMEM270Q6UE05 265 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 LCLAT1Q6UWP7 414 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 SLC41A1Q8IVJ1 513 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 ZNF513Q8N8E2 541 aaPredicted RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 WFDC5Q8TCV5 224 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 NETO1Q8TDF5 533 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 SORCS1Q8WY21 1168 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 KCTD13Q8WZ19 329 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 EDEM1Q92611 657 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 SECISBP2LQ93073 1101 aaKnown RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 RTKNQ9BST9 563 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 BBS2Q9BXC9 721 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 HSD3B7Q9H2F3 369 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 FAM124BQ9H5Z6 455 aaPredicted RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 SIX2Q9NPC8 291 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 FSCN3Q9NQT6 498 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 DNAJC17Q9NVM6 304 aaKnown RBP8.21□□□□□ -1.1
PNKP-229ENST00000637897 FANCLQ9NW38 375 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 CACNA2D2Q9NY47 1150 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 IFNKQ9P0W0 207 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 DEC1Q9P2X7 70 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 RASAL2Q9UJF2 1139 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 STOML2Q9UJZ1 356 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 RAB23Q9ULC3 237 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.21□□□□□ -1.13e-6■■■■□ 21.1
PNKP-229ENST00000637897 NFE2L3Q9Y4A8 694 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 ASPMQ8IZT6 3477 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 CEP192Q8TEP8 1941 aa8.21□□□□□ -1.1
PNKP-229ENST00000637897 BAHCC1Q9P281 2608 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 IGHV1OR15-9A0A0B4J2B8 117 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 GOLGA6L7A0A1B0GV03 622 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 SLC12A8A0AV02 714 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 GIPC1O14908 333 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 NRDCO43847 1150 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 ZNF18P17022 549 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 NDUFV2P19404 249 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CDK11BP21127 795 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 HOXD9P28356 352 aaPredicted RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 SLC6A4P31645 630 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 IL12RB1P42701 662 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 GPD2P43304 727 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 PSEN1P49768 467 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 LIMK1P53667 647 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 PITX1P78337 314 aaPredicted RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 IRX4P78413 519 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 BST2Q10589 180 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 EIF4EBP2Q13542 120 aaPredicted RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 STIM1Q13586 685 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CNGA2Q16280 664 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 SGO2Q562F6 1265 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 FAM133BQ5BKY9 247 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms