RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NDUFA13Q9P0J0 144 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 STX18Q9P2W9 335 aaKnown RBP4.12□□□□□ -1.75
SCN1A-214ENST00000637038 NXF1Q9UBU9 619 aaKnown RBP4.12□□□□□ -1.75
SCN1A-214ENST00000637038 DNAJB4Q9UDY4 337 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 RABGEF1Q9UJ41 708 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 PCDHB8Q9UN66 801 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 MAD1L1Q9Y6D9 718 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 TRIP11Q15643 1979 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 TMEM150BA6NC51 233 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 A8MUI8 341 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 B2RBV5 119 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SPATA31C2B4DYI2 1134 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 TRIM49D1C9J1S8 452 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 F8VP50 259 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 M0QYV0 167 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 BAG2O95816 211 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SETSIPP0DME0 302 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 MYL2P10916 166 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 VDRP11473 427 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 MYL4P12829 197 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ATP4AP20648 1035 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 GCAP28676 217 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SDC4P31431 198 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF132P52740 706 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 XIAPP98170 497 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 DSG1Q02413 1049 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ASPHQ12797 758 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 DPYSL3Q14195 570 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 HSP90AA5PQ58FG0 334 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SCARA3Q6AZY7 606 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 OR6B2Q6IFH4 312 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 MPZL3Q6UWV2 235 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ABHD15Q6UXT9 468 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 KYAT3Q6YP21 454 aaKnown RBP4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SCUBE1Q8IWY4 988 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 PHC3Q8NDX5 983 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 CATSPER1Q8NEC5 780 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 TEKT4Q8WW24 435 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ATG4CQ96DT6 458 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 PWWP2AQ96N64 755 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 ZBED2Q9BTP6 218 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 FAM126AQ9BYI3 521 aaPredicted RBP4.12□□□□□ -1.75
SCN1A-214ENST00000637038 SLCO1B3Q9NPD5 702 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 RAB6BQ9NRW1 208 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 MRGBPQ9NV56 204 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 GRID1Q9ULK0 1009 aa4.12□□□□□ -1.75
SCN1A-214ENST00000637038 KPNA7A9QM74 516 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 E7ESA3 106 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GOLGA8RI6L899 631 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ATP9AO75110 1047 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GLRA3O75311 464 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 H2AFYO75367 372 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ZSCAN5DPP0CG00 497 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 KCNA2P16389 499 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GRK2P25098 689 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SSTR1P30872 391 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ARL2P36404 184 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 FDFT1P37268 417 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ELK3P41970 407 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 PHKA2P46019 1235 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 STAT5BP51692 787 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 DEUP1Q05D60 604 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SIGLEC14Q08ET2 396 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF394Q53GI3 561 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 C2CD6Q53TS8 623 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 RASIP1Q5U651 963 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 IL31Q6EBC2 164 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 AAGABQ6PD74 315 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GADL1Q6ZQY3 521 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 HACE1Q8IYU2 909 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 TTC30BQ8N4P2 665 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 AFAP1L2Q8N4X5 818 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 NAT8LQ8N9F0 302 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF280CQ8ND82 737 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 NETO1Q8TDF5 533 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ACMSDQ8TDX5 336 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SNRNP27Q8WVK2 155 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SEPT1Q8WYJ6 367 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 CPT1BQ92523 772 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 CMTM5Q96DZ9 223 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 HEXIM2Q96MH2 286 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ACAP3Q96P50 834 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SRPK1Q96SB4 655 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF184Q99676 751 aaPredicted RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 NIFKQ9BYG3 293 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SUDS3Q9H7L9 328 aaPredicted RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 PNPLA8Q9NP80 782 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 METTL5Q9NRN9 209 aaKnown RBP4.11□□□□□ -1.75
SCN1A-214ENST00000637038 DLGAP2Q9P1A6 1054 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 PCSK1NQ9UHG2 260 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 USP18Q9UMW8 372 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ENO4A6NNW6 628 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GSC2O15499 205 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 KCNN4O15554 427 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 VNN1O95497 513 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 GNAZP19086 355 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 BGNP21810 368 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 SERPINB3P29508 390 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ICAM3P32942 547 aa4.11□□□□□ -1.75
SCN1A-214ENST00000637038 ARL4AP40617 200 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms