RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	AMH	P03971	560 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	BPGM	P07738	259 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PDGFRB	P09619	1106 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	DPEP1	P16444	411 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NELFE	P18615	380 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SLC1A6	P48664	564 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GK3P	Q14409	553 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CNPY1	Q3B7I2	92 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GLRA4	Q5JXX5	417 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PMF1	Q6P1K2	205 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CCNY	Q8ND76	341 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	USP13	Q92995	863 aa	Predicted RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TMEM176A	Q96HP8	235 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TUBB6	Q9BUF5	446 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	RPF1	Q9H9Y2	349 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PGAP2	Q9UHJ9	254 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CPSF3	Q9UKF6	684 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	APOBEC2	Q9Y235	224 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LRRC37A	A6NMS7	1700 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LCP1	P13796	627 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	RAG1	P15918	1043 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	STIP1	P31948	543 aa	Known RBP	13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GPD2	P43304	727 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TMEM62	Q0P6H9	643 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TEX44	Q53QW1	395 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KCNT2	Q6UVM3	1135 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NIPA2	Q8N8Q9	360 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ZNF280C	Q8ND82	737 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PIP4K2C	Q8TBX8	421 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GDPD5	Q8WTR4	605 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TEX13B	Q9BXU2	312 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SSU72	Q9NP77	194 aa	Known RBP	13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NRBP2	Q9NSY0	501 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	FIS1	Q9Y3D6	152 aa		13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	COL11A2	P13942	1736 aa	Predicted RBP	13.46	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ZNF831	Q5JPB2	1677 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	HNRNPCL1	O60812	293 aa	Known RBP	13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ARIH2	O95376	493 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	TGDS	O95455	350 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	C1QA	P02745	245 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	MGAT1	P26572	445 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	RANBP1	P43487	201 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	TAP1	Q03518	808 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	CCDC14	Q49A88	953 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	LGSN	Q5TDP6	509 aa		13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	WDR75	Q8IWA0	830 aa	Known RBP	13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	UBE2O	Q9C0C9	1292 aa	Known RBP	13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.46	□□□□□ -0.26
CHRNA7-223	ENST00000637033	SIN3B	O75182	1162 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	GRIA2	P42262	883 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	NUMB	P49757	651 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	MMEL1	Q495T6	779 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	SPDYA	Q5MJ70	313 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PPM1L	Q5SGD2	360 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	FRMD7	Q6ZUT3	714 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	MAVS	Q7Z434	540 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	FAM83A	Q86UY5	434 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ZBTB8OS	Q8IWT0	167 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	GALNT4	Q8N4A0	578 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	FAM156A	Q8NDB6	213 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	RDM1	Q8NG50	284 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ETAA1	Q9NY74	926 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	TMEM216	Q9P0N5	145 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PAK5	Q9P286	719 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	APPL1	Q9UKG1	709 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	SOX13	Q9UN79	622 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	HES2	Q9Y543	173 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	LY75	O60449	1722 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	MED7	O43513	233 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	TRPA1	O75762	1119 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	VTN	P04004	478 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ADORA2B	P29275	332 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PKNOX1	P55347	436 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	GOLGA7B	Q2TAP0	167 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	C11orf91	Q3C1V1	193 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	EFHC1	Q5JVL4	640 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ANGEL2	Q5VTE6	544 aa	Known RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	IYD	Q6PHW0	289 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	FAM131B	Q86XD5	332 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	SPATA6L	Q8N4H0	392 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ANKRD27	Q96NW4	1050 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ZNF518B	Q9C0D4	1074 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PCDH18	Q9HCL0	1135 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	DDX18	Q9NVP1	670 aa	Known RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PCDHGC3	Q9UN70	934 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	SLC4A7	Q9Y6M7	1214 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	KIAA1217	Q5T5P2	1943 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	KCNK1	O00180	336 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PPEF2	O14830	753 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	FARP2	O94887	1054 aa	Predicted RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ALDOA	P04075	364 aa	Known RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	CYP2F1	P24903	491 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	TYK2	P29597	1187 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	ZNF143	P52747	638 aa	Predicted RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	LAMB3	Q13751	1172 aa		13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	PDE1C	Q14123	709 aa	Predicted RBP	13.45	□□□□□ -0.26
CHRNA7-223	ENST00000637033	MYLK4	Q86YV6	388 aa	Predicted RBP	13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms