RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 DNALI1O14645 258 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ADCY6O43306 1168 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CSF1RP07333 972 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 GYS1P13807 737 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 H2AFXP16104 143 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 HTR1BP28222 390 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RAB27AP51159 221 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PDK2Q15119 407 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 INSCQ1MX18 579 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 BOLA3Q53S33 107 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MROH9Q5TGP6 573 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CENPSQ8N2Z9 138 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 DDHD1Q8NEL9 900 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 GJD4Q96KN9 370 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MTG1Q9BT17 334 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MYH11P35749 1972 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 GRXCR2A6NFK2 248 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 H3BUI4 141 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MYL12BO14950 172 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NCAM2O15394 837 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CXCR2P25025 360 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CNTFP26441 200 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TCF7P36402 384 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RAD23AP54725 363 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CYP2A13Q16696 494 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SVOPQ8N4V2 548 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 HAVCR1Q96D42 359 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 C17orf75Q9HAS0 396 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 DCP1AQ9NPI6 582 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF214Q9UL59 606 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NPC1L1Q9UHC9 1359 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PDE2AO00408 941 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM66O15016 1216 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KMOO15229 486 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ZBTB14O43829 449 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 LDOC1O95751 146 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KCNA3P22001 575 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TKTP29401 623 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SRSF11Q05519 484 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RGS1Q08116 209 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PTGES3Q15185 160 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TRIP10Q15642 601 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 BNIPLQ7Z465 357 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PROSER1Q86XN7 944 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TMEM199Q8N511 208 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 UBE2E3Q969T4 207 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF354BQ96LW1 612 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 BPIFA3Q9BQP9 254 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NAT9Q9BTE0 207 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 OSBPL8Q9BZF1 889 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MAPRE3Q9UPY8 281 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SLC9A8Q9Y2E8 581 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RPS6KL1Q9Y6S9 549 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 LAMC1P11047 1609 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SDR42E2A6NKP2 422 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 GLRA3O75311 464 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 HLA-DRAP01903 254 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RBP3P10745 1247 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 THRAP10827 490 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ACO1P21399 889 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NMT1P30419 496 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CHRNA5P30532 468 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MTAPQ13126 283 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NR6A1Q15406 480 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 FGD3Q5JSP0 725 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 COLEC12Q5KU26 742 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 OLFML2BQ68BL8 750 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RETSATQ6NUM9 610 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PRMT9Q6P2P2 845 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ULK3Q6PHR2 472 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 BHLHB9Q6PI77 547 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 DOK6Q6PKX4 331 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ELOA2Q8IYF1 753 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CLIP3Q96DZ5 547 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ACOX2Q99424 681 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 APOL4Q9BPW4 351 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SPATA5L1Q9BVQ7 753 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 DCLK3Q9C098 648 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NT5MQ9NPB1 228 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ADPRHL2Q9NX46 363 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TUBE1Q9UJT0 475 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 BTBD3Q9Y2F9 522 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF7P17097 686 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CLCN6P51797 869 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ACAP2Q15057 778 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MEA1Q16626 185 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 FAM98BQ52LJ0 330 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KIAA1324Q6UXG2 1013 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SPPL2AQ8TCT8 520 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CXorf40BQ96DE9 158 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RASSF1Q9NS23 344 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ANKEF1Q9NU02 776 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 AMACRQ9UHK6 382 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 GSTK1Q9Y2Q3 226 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 A0A087WWV3 80 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CCNT2O60583 730 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms