RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 A0A1W2PPC4 97 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 hCG_1642624A0A1W2PR95 340 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 GLTPD2A6NH11 291 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 LINC01548A6NM66 108 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 F8W8V4 182 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 ADAMTS3O15072 1205 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 NPHP1O15259 732 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SH3BP5O60239 455 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TOP3BO95985 862 aaKnown RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 CD1AP06126 327 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 THP07101 528 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PARP1P09874 1014 aaKnown RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 ALOX15P16050 662 aaPredicted RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 FPR1P21462 350 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 MPGP29372 298 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PTPN7P35236 360 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 RFC4P35249 363 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 GRK6P43250 576 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PIK3CGP48736 1102 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PPM1FP49593 454 aaPredicted RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 FLT3LGP49771 235 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 CCT4P50991 539 aaKnown RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SOX8P57073 446 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 RAP2BP61225 183 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TRIM14Q14142 442 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 RALBP1Q15311 655 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TUBB8Q3ZCM7 444 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SUPT20HL1Q3ZLR7 823 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PABPC1LQ4VXU2 614 aaKnown RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 FAM47AQ5JRC9 791 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 OTUD7BQ6GQQ9 843 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TLDC1Q6P9B6 456 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 CCDC33Q8N5R6 958 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 DCBLD1Q8N8Z6 715 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 Q8NA96 180 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SPATA5Q8NB90 893 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SEMA6DQ8NFY4 1073 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 OR6B3Q8NGW1 331 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 STON2Q8WXE9 905 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TMEM41AQ96HV5 264 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SCLT1Q96NL6 688 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 SH2D3AQ9BRG2 576 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 C11orf54Q9H0W9 315 aaPredicted RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PANK3Q9H999 370 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 AGO4Q9HCK5 861 aaKnown RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 COL20A1Q9P218 1284 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 KCNE5Q9UJ90 142 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 CDC23Q9UJX2 597 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 ST3GAL5Q9UNP4 418 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 PAXBP1Q9Y5B6 917 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 ACTL7AQ9Y615 435 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 DNAH12Q6ZR08 3092 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 TAF1P21675 1872 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 CDH23Q9H251 3354 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ABCC12Q96J65 1359 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TRIM43BA6NCK2 446 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 APOL1O14791 398 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 YY2O15391 372 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 RNMTO43148 476 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PEX1O43933 1283 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TLR5O60602 858 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PLA2G6O60733 806 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CAMTA2O94983 1202 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 GPANK1O95872 356 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 AHSGP02765 367 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 GNAI3P08754 354 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 HSPA5P11021 654 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 MTHFD1P11586 935 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 HDCP19113 662 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 GCSHP23434 173 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CCKARP32238 428 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 TECP42680 631 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ALDH1A3P47895 512 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CCT5P48643 541 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 HSPA7P48741 367 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 MTHFSP49914 203 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 RENBPP51606 427 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF134P52741 427 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 GNAI1P63096 354 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 HTRA4P83105 476 aaPredicted RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CREMQ03060 361 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ICA1Q05084 483 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 GRM1Q13255 1194 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PMS2P11Q13670 270 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 KIF22Q14807 665 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ELF2Q15723 593 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 MTHFSDQ2M296 383 aaKnown RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ARL13BQ3SXY8 428 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF260Q3ZCT1 412 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CRY2Q49AN0 593 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PLEKHO1Q53GL0 409 aaPredicted RBP2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 AFMIDQ63HM1 303 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 SULT6B1Q6IMI4 303 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PRR5LQ6MZQ0 368 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 PGBD2Q6P3X8 592 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 CCDC174Q6PII3 467 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF783Q6ZMS7 281 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 SEM1Q6ZVN7 128 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF354CQ86Y25 554 aa2.91□□□□□ -1.94
SMARCB1-208ENST00000634926 LIX1LQ8IVB5 337 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms