RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 LCHNA4D1U4 455 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 MDM4O15151 490 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 TJP3O95049 919 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 CHRNA3P32297 505 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RDXP35241 583 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 COILP38432 576 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 PGFP49763 221 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARSEP51690 589 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 VSNL1P62760 191 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 KRT81Q14533 505 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 PDK2Q15119 407 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 TAZQ16635 292 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 CYP1B1Q16678 543 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 CA9Q16790 459 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 ZC3H12AQ5D1E8 599 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 TTC27Q6P3X3 843 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 FBXO38Q6PIJ6 1188 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 BEND5Q7L4P6 421 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 SCD5Q86SK9 330 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 FAM131BQ86XD5 332 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RFX6Q8HWS3 928 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RNF135Q8IUD6 432 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 KLHL23Q8NBE8 558 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 DQX1Q8TE96 717 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 GIPC2Q8TF65 315 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 CLP1Q92989 425 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 SPATA17Q96L03 361 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 TRIM62Q9BVG3 475 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 CALN1Q9BXU9 219 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 DCLK3Q9C098 648 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 MTIF3Q9H2K0 278 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 FAM204AQ9H8W3 233 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 NMUR1Q9HB89 426 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 MRPL17Q9NRX2 175 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 ABCC13Q9NSE7 274 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RRN3Q9NYV6 651 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 AFF4Q9UHB7 1163 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 RAB21Q9UL25 225 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 SCML2Q9UQR0 700 aa10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 R3HDM2Q9Y2K5 976 aaKnown RBP10.33□□□□□ -0.76
SOX2-OT-244ENST00000627738 SLC38A8A6NNN8 435 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 TTI1O43156 1089 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ABLIM3O94929 683 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 HEXIM1O94992 359 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 RTN3O95197 1032 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 SEC24AO95486 1093 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 TUBBP07437 444 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 H2AFXP16104 143 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ATF6P18850 670 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 YWHAQP27348 245 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 KCNJ1P48048 391 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 TUFMP49411 452 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 DYNLT1P63172 113 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 DR1Q01658 176 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 SNX1Q13596 522 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MTMR3Q13615 1198 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 RAB33AQ14088 237 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 DPYSL3Q14195 570 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 KCTD19Q17RG1 926 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 TPGS2Q68CL5 300 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 WDR93Q6P2C0 686 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 CCDC137Q6PK04 289 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MAATS1Q7Z4T9 603 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 TAC4Q86UU9 113 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MON1AQ86VX9 555 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MAP7D3Q8IWC1 876 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ZNF461Q8TAF7 563 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ATG4AQ8WYN0 398 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 FBXO32Q969P5 355 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 HAUS1Q96CS2 278 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 PGAP3Q96FM1 320 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 FAM118BQ9BPY3 351 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MAK16Q9BXY0 300 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 MAGEB5Q9BZ81 275 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ZBP1Q9H171 429 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 DHX35Q9H5Z1 703 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 PCDH18Q9HCL0 1135 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 PIGVQ9NUD9 493 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARGLU1Q9NWB6 273 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 COMMD8Q9NX08 183 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 DDIT4Q9NX09 232 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 IL37Q9NZH6 218 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 GMIPQ9P107 970 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 STIM2Q9P246 746 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 PCYOX1Q9UHG3 505 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 FZD10Q9ULW2 581 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 AP4E1Q9UPM8 1137 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 EFR3BQ9Y2G0 817 aa10.32□□□□□ -0.76
SOX2-OT-244ENST00000627738 COL4A4P53420 1690 aaPredicted RBP10.31□□□□□ -0.76
SOX2-OT-244ENST00000627738 FAM92AA1XBS5 289 aa10.31□□□□□ -0.76
SOX2-OT-244ENST00000627738 ZSCAN5CA6NGD5 496 aaPredicted RBP10.31□□□□□ -0.76
SOX2-OT-244ENST00000627738 TEX28O15482 410 aa10.31□□□□□ -0.76
SOX2-OT-244ENST00000627738 ATP9BO43861 1147 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms