RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 SIK2Q9H0K1 926 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CASS4Q9NQ75 786 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TBCCD1Q9NVR7 557 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 VPS54Q9P1Q0 977 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TPCN1Q9ULQ1 816 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PCDHB8Q9UN66 801 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PLEKHA6Q9Y2H5 1048 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 BHLHE40O14503 412 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ANKRD28O15084 1053 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MSH4O15457 936 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ADAM11O75078 769 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 FKBP9O95302 570 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TCF4P15884 667 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 STT3AP46977 705 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 HIRAP54198 1017 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 GPX6P59796 221 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 DEFA6Q01524 100 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 NSUN2Q08J23 767 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATRX-212ENST00000623706 CSTF3Q12996 717 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 DUOXA1Q1HG43 343 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 SLFNL1Q499Z3 407 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MIIPQ5JXC2 388 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 FKBP9P1Q75LS8 142 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 OTOAQ7RTW8 1153 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 NLRP8Q86W28 1048 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 GALNT13Q8IUC8 556 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 DHX40Q8IX18 779 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 UBQLNLQ8IYU4 475 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 SPARTQ8N0X7 666 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 JPH3Q8WXH2 748 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 RAD54LQ92698 747 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ESR2Q92731 530 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 SEMA4DQ92854 862 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TMEM203Q969S6 136 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CDKN2AIPNLQ96HQ2 116 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 LRFN5Q96NI6 719 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MIPEPQ99797 713 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 DDX50Q9BQ39 737 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 NLNQ9BYT8 704 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 OSBPL2Q9H1P3 480 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 KDM4CQ9H3R0 1056 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MTG2Q9H4K7 406 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MCM9Q9NXL9 1143 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PCDHA11Q9Y5I1 949 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 A0A1B0GVL5 298 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 BTBD17A6NE02 478 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ANKDD1BA6NHY2 528 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 LRRC53A6NM62 1247 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 BMPR1BO00238 502 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 EIF3HO15372 352 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATRX-212ENST00000623706 ATP1A3P13637 1013 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 STIP1P31948 543 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 CTNNB1P35222 781 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PLTPP55058 493 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 BPIFB4P59827 614 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ENPEPQ07075 957 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PDE4BQ07343 736 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TMED2Q15363 201 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PLEKHG6Q3KR16 790 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TTC39BQ5VTQ0 682 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 HAGHLQ6PII5 290 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 CCDC28AQ8IWP9 274 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 RAB42Q8N4Z0 105 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 C12orf45Q8N5I9 185 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 OR4K17Q8NGC6 315 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CEP76Q8TAP6 659 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 HDAC10Q969S8 669 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 VPS33AQ96AX1 596 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 GPA33Q99795 319 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ZNF471Q9BX82 626 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 PUS3Q9BZE2 481 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 PRKD2Q9BZL6 878 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 DDX47Q9H0S4 455 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 EPB41L4AQ9HCS5 686 aaPredicted RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 NMRK1Q9NWW6 199 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CMTM6Q9NX76 183 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 MTMR4Q9NYA4 1195 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 SUCOQ9UBS9 1254 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 TJP2Q9UDY2 1190 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TBC1D30Q9Y2I9 924 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 SALL3Q9BXA9 1300 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 E7ENX8 843 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 FKTNO75072 461 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 PTCD1O75127 700 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 HEXIM1O94992 359 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 IFNB1P01574 187 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ERCC2P18074 760 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 HSD17B3P37058 310 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TUBB4BP68371 445 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CCNA1P78396 465 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 GSTO1P78417 241 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 ST5P78524 1137 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TAP2Q03519 686 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 GPR176Q14439 515 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CCNYL2Q5T2Q4 361 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 LEMD1Q68G75 181 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 TYW3Q6IPR3 259 aaKnown RBP3.57□□□□□ -1.84
ATRX-212ENST00000623706 CENPPQ6IPU0 288 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CHRDL2Q6WN34 429 aa3.57□□□□□ -1.84
ATRX-212ENST00000623706 CREB3L2Q70SY1 520 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms