RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LEMD2Q8NC56 503 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 EXD1Q8NHP7 514 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 SMG7Q92540 1137 aaKnown RBP18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 CDC23Q9UJX2 597 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 TLR6Q9Y2C9 796 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC12A8A0AV02 714 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 PI4K2BG5E9Z4 385 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 LINC01565O15544 149 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 SLU7O95391 586 aaKnown RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 GLP2RO95838 553 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 GJA1P17302 382 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TBX4P57082 545 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 EIF4EBP2Q13542 120 aaPredicted RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TUBB2AQ13885 445 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TRIP4Q15650 581 aaPredicted RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 ARL13BQ3SXY8 428 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 ZC3H12AQ5D1E8 599 aaKnown RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 SEL1L2Q5TEA6 688 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TXNDC8Q6A555 127 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 AADACL2Q6P093 401 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 GRASPQ7Z6J2 395 aaPredicted RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 RCOR2Q8IZ40 523 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 RAPGEF5Q92565 580 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 RNF25Q96BH1 459 aaPredicted RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 RBM41Q96IZ5 413 aaKnown RBP18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TUBB2BQ9BVA1 445 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TMPRSS4Q9NRS4 437 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 TMEM51Q9NW97 253 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 FZD10Q9ULW2 581 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 AP4E1Q9UPM8 1137 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 MRFAP1Q9Y605 127 aa18.51■□□□□ 0.55
PTCHD3-202ENST00000622555 CES2O00748 559 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 HMBSP08397 361 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 CCR1P32246 355 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 ADRA1BP35368 520 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 CCR2P41597 374 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 NTHL1P78549 312 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 NNTQ13423 1086 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 RARS2Q5T160 578 aaKnown RBP18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 CMASQ8NFW8 434 aaPredicted RBP18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 NTAN1Q96AB6 310 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 LRCH3Q96II8 777 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 MS4A14Q96JA4 679 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 TKTL2Q9H0I9 626 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 DHX35Q9H5Z1 703 aaKnown RBP18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
PTCHD3-202ENST00000622555 IGFBP4P22692 258 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 KPNA1P52294 538 aaPredicted RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 AIF1P55008 147 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CDH6P55285 790 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 KRT81Q14533 505 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 PPP2R5DQ14738 602 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CA9Q16790 459 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 EFHC2Q5JST6 749 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 BRMS1LQ5PSV4 323 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CCDC181Q5TID7 509 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 TMEM184AQ6ZMB5 413 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 MAB21L3Q8N8X9 362 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 SHKBP1Q8TBC3 707 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 TCEAL4Q96EI5 215 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 FCRL2Q96LA5 508 aaPredicted RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 FAM161BQ96MY7 647 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 RNF38Q9H0F5 515 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 HBS1LQ9Y450 684 aaKnown RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 NRG2O14511 850 aaPredicted RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 APOEP02649 317 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC2A3P11169 496 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 MBL2P11226 248 aaPredicted RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 KDELR1P24390 212 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CETN2P41208 172 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 ADGRE1Q14246 886 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 LLGL1Q15334 1064 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC5A9Q2M3M2 681 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 ARHGAP15Q53QZ3 475 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CREG2Q8IUH2 290 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 PSTKQ8IV42 348 aaKnown RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 ARL14EPQ8N8R7 260 aaPredicted RBP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC39A13Q96H72 371 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 CYP2S1Q96SQ9 504 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 APOL5Q9BWW9 433 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 ANLNQ9NQW6 1124 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 ARHGEF38Q9NXL2 777 aa18.49■□□□□ 0.55
PTCHD3-202ENST00000622555 PAPLNO95428 1278 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 MOCS2O96007 188 aaPredicted RBP18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 HDCP19113 662 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 SCAPQ12770 1279 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 PDK2Q15119 407 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 TEAD2Q15562 447 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 WHAMMP3Q1A5X7 153 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 PPP6R3Q5H9R7 873 aaPredicted RBP18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 ANKRD54Q6NXT1 300 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 MFSD7Q6UXD7 560 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 SPOCD1Q6ZMY3 1216 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 MTERF4Q7Z6M4 381 aaKnown RBP18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 MAP7D3Q8IWC1 876 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC22A12Q96S37 553 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms