RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MFAP3P55082 362 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 STILQ15468 1287 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 TRIP4Q15650 581 aaPredicted RBP25.1■■□□□ 1.61
ATXN3-253ENST00000621269 UCMAQ8WVF2 138 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 TFAP2BQ92481 460 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 P2RY11Q96G91 374 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 NUSAP1Q9BXS6 441 aaKnown RBP25.1■■□□□ 1.61
ATXN3-253ENST00000621269 TMEM9BQ9NQ34 198 aa25.1■■□□□ 1.61
ATXN3-253ENST00000621269 HBS1LQ9Y450 684 aaKnown RBP25.1■■□□□ 1.61
ATXN3-253ENST00000621269 SDK1Q7Z5N4 2213 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 YJEFN3A6XGL0 299 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 E7ENQ6 273 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 NPC1O15118 1278 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 STX17P56962 302 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 IRX4P78413 519 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 PAK1Q13153 545 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 STARD3Q14849 445 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 E2F5Q15329 346 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 CNGA2Q16280 664 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 PKDCCQ504Y2 493 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 TRIM61Q5EBN2 209 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 RRAGAQ7L523 313 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 SCML4Q8N228 414 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 EHBP1Q8NDI1 1231 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 LMO3Q8TAP4 145 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 SLC2A11Q9BYW1 496 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 SFMBT1Q9UHJ3 866 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 EVLQ9UI08 416 aaPredicted RBP25.09■■□□□ 1.61
ATXN3-253ENST00000621269 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.09■■□□□ 1.61
ATXN3-253ENST00000621269 STON1Q9Y6Q2 735 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 THADAQ6YHU6 1953 aa25.09■■□□□ 1.61
ATXN3-253ENST00000621269 WASH3PC4AMC7 463 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 M0QYV0 167 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 RNF225M0QZC1 329 aaPredicted RBP25.08■■□□□ 1.61
ATXN3-253ENST00000621269 RGS7P49802 495 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 DAOAP59103 153 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 KCNH2Q12809 1159 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 LMAN2Q12907 356 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 GEN1Q17RS7 908 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 MPPE1Q53F39 396 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 ANKS1BQ7Z6G8 1248 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 FAM217AQ8IXS0 508 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 DEFB119Q8N690 84 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 RBBP8NLQ8NC74 664 aaPredicted RBP25.08■■□□□ 1.61
ATXN3-253ENST00000621269 SLC35F5Q8WV83 523 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 KAT5Q92993 513 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 CNTNAP3BQ96NU0 1288 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 CNTNAP3Q9BZ76 1288 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 CD248Q9HCU0 757 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 TMEM74BQ9NUR3 256 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 CYP8B1Q9UNU6 501 aa25.08■■□□□ 1.61
ATXN3-253ENST00000621269 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.08■■□□□ 1.61
ATXN3-253ENST00000621269 KCNK5O95279 499 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 FGFR1OPO95684 399 aaKnown RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 AFPP02771 609 aaKnown RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 BRD2P25440 801 aaKnown RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 GCNT1Q02742 428 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 N4BP2L1Q5TBK1 243 aaPredicted RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 PMF1Q6P1K2 205 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 TRIM59Q8IWR1 403 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 IRGQQ8WZA9 623 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 GOLGA1Q92805 767 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 PIWIL1Q96J94 861 aaKnown RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 MRGPRX1Q96LB2 322 aa25.07■■□□□ 1.6
ATXN3-253ENST00000621269 SRRTQ9BXP5 876 aaKnown RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 THAP10Q9P2Z0 257 aaPredicted RBP25.07■■□□□ 1.6
ATXN3-253ENST00000621269 NCOR2Q9Y618 2525 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 IGHV1OR15-9A0A0B4J2B8 117 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 PIK3R2O00459 728 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 TSPAN3O60637 253 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ITPKAP23677 461 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ZNF132P52740 706 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ZNF445P59923 1031 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 KIAA1324Q6UXG2 1013 aaKnown RBP25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ARHGEF19Q8IW93 802 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 CIPCQ9C0C6 399 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ELOVL2Q9NXB9 296 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 PILRBQ9UKJ0 227 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ATXN2Q99700 1313 aaKnown RBP25.06■■□□□ 1.6
ATXN3-253ENST00000621269 LAMA1P25391 3075 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 ABCA7Q8IZY2 2146 aa25.06■■□□□ 1.6
ATXN3-253ENST00000621269 TIMM44O43615 452 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 SYNCRIPO60506 623 aaKnown RBP25.05■■□□□ 1.6
ATXN3-253ENST00000621269 NDUFS2O75306 463 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 HOXD12P35452 270 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 MARSP56192 900 aaKnown RBP25.05■■□□□ 1.6
ATXN3-253ENST00000621269 ARID5AQ03989 594 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 ZNF33AQ06730 810 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 EIF4HQ15056 248 aaKnown RBP25.05■■□□□ 1.6
ATXN3-253ENST00000621269 CEP76Q8TAP6 659 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 HSFY1Q96LI6 401 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 ZSWIM1Q9BR11 485 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 SLC6A17Q9H1V8 727 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 CLEC4EQ9ULY5 219 aa25.05■■□□□ 1.6
ATXN3-253ENST00000621269 CDX4O14627 284 aaPredicted RBP25.04■■□□□ 1.6
ATXN3-253ENST00000621269 MSI1O43347 362 aaKnown RBP25.04■■□□□ 1.6
ATXN3-253ENST00000621269 FBXO21O94952 628 aa25.04■■□□□ 1.6
ATXN3-253ENST00000621269 LATS1O95835 1130 aa25.04■■□□□ 1.6
ATXN3-253ENST00000621269 CALCAP01258 141 aa25.04■■□□□ 1.6
ATXN3-253ENST00000621269 CFIP05156 583 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms