RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 KIAA1257Q9ULG3 409 aa6.37□□□□□ -1.39
SSX4B-202ENST00000619890 SCML2Q9UQR0 700 aa6.37□□□□□ -1.39
SSX4B-202ENST00000619890 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
SSX4B-202ENST00000619890 C2orf78A6NCI8 922 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SPECC1L-ADORA2AF8WAN1 911 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 XPO1O14980 1071 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 TLR5O60602 858 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ZDHHC11BP0C7U3 371 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 VDRP11473 427 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 HDCP19113 662 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CTHP32929 405 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 MTIF2P46199 727 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 KPNA1P52294 538 aaPredicted RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 RAD23BP54727 409 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 BST2Q10589 180 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 RUNX3Q13761 415 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 STX1AQ16623 288 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ZNF394Q53GI3 561 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 DGKKQ5KSL6 1271 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 PPP1R26Q5T8A7 1209 aaPredicted RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 KLHDC10Q6PID8 442 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 TRIM65Q6PJ69 517 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 TREML4Q6UXN2 200 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CCDC186Q7Z3E2 898 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ZNF843Q8N446 348 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 UBR7Q8N806 425 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ARL14EPQ8N8R7 260 aaPredicted RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ANKRD52Q8NB46 1076 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SLC4A11Q8NBS3 891 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CCDC26Q8TAB7 109 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SH3RF2Q8TEC5 729 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 GAB3Q8WWW8 586 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 FAM3CQ92520 227 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ELMO3Q96BJ8 720 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 OTUB2Q96DC9 234 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CRELD1Q96HD1 420 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ZC3H10Q96K80 434 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 HEXIM2Q96MH2 286 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 KCNK16Q96T55 309 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 FAM83CQ9BQN1 747 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 UBXN6Q9BZV1 441 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 NACA2Q9H009 215 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 INTS2Q9H0H0 1204 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SMG9Q9H0W8 520 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ALG2Q9H553 416 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CYLDQ9NQC7 956 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CLIC5Q9NZA1 410 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 TBC1D14Q9P2M4 693 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 APEX2Q9UBZ4 518 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 TSPAN16Q9UKR8 245 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CCL26Q9Y258 94 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 CPQQ9Y646 472 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 ABCA12Q86UK0 2595 aa6.36□□□□□ -1.39
SSX4B-202ENST00000619890 SPTAN1Q13813 2472 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 URB1O60287 2271 aaKnown RBP6.36□□□□□ -1.39
SSX4B-202ENST00000619890 E2F8A0AVK6 867 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LNP1A1A4G5 178 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 HHLA1C9JL84 531 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CFAP99D6REC4 459 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 H0Y626 953 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LEFTY2O00292 366 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 O00370 1275 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CYP26A1O43174 497 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 COCHO43405 550 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 RPP40O75818 363 aaKnown RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 BEST1O76090 585 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TRIM16O95361 564 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ABL1P00519 1130 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TPM2P07951 284 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 MBL2P11226 248 aaPredicted RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 RALAP11233 206 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CD19P15391 556 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 PTMSP20962 102 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 EEF1GP26641 437 aaKnown RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 PLA2G4AP47712 749 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 MMP16P51512 607 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 KIF11P52732 1056 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ZNF132P52740 706 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 MFAP3P55082 362 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 NR1H3Q13133 447 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 EXOC3L4Q17RC7 722 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 GOLGA7BQ2TAP0 167 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 FBXO43Q4G163 708 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 CCDC183Q5T5S1 534 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TMEM270Q6UE05 265 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SASS6Q6UVJ0 657 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 GBP6Q6ZN66 633 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SND1Q7KZF4 910 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSX4B-202ENST00000619890 TMEFF1Q8IYR6 380 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SIX6OS1Q8N1H7 587 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 SCML4Q8N228 414 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 ZNF276Q8N554 614 aa6.35□□□□□ -1.39
SSX4B-202ENST00000619890 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms