RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CBWD2Q8IUF1 395 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 OR8H2Q8N162 312 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 NBPF15Q8N660 670 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 DNERQ8NFT8 737 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 BBS4Q96RK4 519 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 PACSIN1Q9BY11 444 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 CELF4Q9BZC1 486 aaKnown RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 SIK3Q9Y2K2 1263 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 A0A087X0T9 212 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF286BP0CG31 522 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ACADSP16219 412 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 OR1E1P30953 314 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TCEAL5Q5H9L2 206 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 BNC2Q6ZN30 1099 aaPredicted RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 RCN1Q15293 331 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TAF13Q15543 124 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 KLHL31Q9H511 634 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 FANCEQ9HB96 536 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 GPAMQ9HCL2 828 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 SH3BP4Q9P0V3 963 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ATP6V1HQ9UI12 483 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 LOC100653049A0A140TA62 436 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ECDO95905 644 aaPredicted RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 OR56A5P0C7T3 313 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ATP6V1B1P15313 513 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CYP11B2P19099 503 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 RASA1P20936 1047 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PON1P27169 355 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 MTM1Q13496 603 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TYW3Q6IPR3 259 aaKnown RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ZDHHC17Q8IUH5 632 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ASZ1Q8WWH4 475 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 BDH2Q9BUT1 245 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 BCL2L14Q9BZR8 327 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PIPSLA2A3N6 862 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TGFB3P10600 412 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CCNI2Q6ZMN8 369 aaPredicted RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TRPC4APQ8TEL6 797 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 USP27XA6NNY8 438 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 KATNA1O75449 491 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 DNAJB2P25686 324 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 RAD23AP54725 363 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ERMARDQ5T6L9 678 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TRIQKQ629K1 86 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PCNX4Q63HM2 1172 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 DDHD1Q8NEL9 900 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 CNTNAP2Q9UHC6 1331 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 GNRH1P01148 92 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 SCNN1BP51168 640 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ATP12AP54707 1039 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 FMR1Q06787 632 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ITIH4Q14624 930 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PDZK1Q5T2W1 519 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXO16Q8IX29 292 aaPredicted RBP11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 MCOLN3Q8TDD5 553 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 KAT2BQ92831 832 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 SGF29Q96ES7 293 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM176AQ96HP8 235 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 ENTPD4Q9Y227 616 aa11.45□□□□□ -0.58
CCDC144B-208ENST00000618081 PIK3R1P27986 724 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SARSP49591 514 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CSNK2BP67870 215 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC13A5Q86YT5 568 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 SCUBE1Q8IWY4 988 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 KLHL4Q9C0H6 718 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 TRIT1Q9H3H1 467 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 RAB23Q9ULC3 237 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CRYL1Q9Y2S2 319 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 VPS4BO75351 444 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 ENDOD1O94919 500 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 GLRBP48167 497 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 NDUFAF6Q330K2 333 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PMF1Q6P1K2 205 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 LRRC4BQ9NT99 713 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 MRPL39Q9NYK5 338 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 A0A0A6YYK5 440 aaPredicted RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 IGF2BP3O00425 579 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 PQBP1O60828 265 aaKnown RBP11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 IL6P05231 212 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 KCNJ1P48048 391 aa11.44□□□□□ -0.58
CCDC144B-208ENST00000618081 FNDC3BQ53EP0 1204 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms