RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 IGFN1Q86VF2 1251 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 SLC38A6Q8IZM9 456 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 RAD54LQ92698 747 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF560Q96MR9 790 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CRAMP1Q96RY5 1269 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 QPCTLQ9NXS2 382 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PCDHGA8Q9Y5G5 932 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 MYO3BQ8WXR4 1341 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PI4K2BG5E9Z4 385 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 BUD23O43709 281 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 GPC4O75487 556 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 NOL4O94818 638 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PSMC2P35998 433 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CCT3P49368 545 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CYP20A1Q6UW02 462 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 MYCT1Q8N699 235 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 TBCKQ8TEA7 893 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ATL1Q8WXF7 558 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 APOPT1Q96IL0 206 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 FARSBQ9NSD9 589 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 H0YC42 278 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 RGS5O15539 181 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 RNMTO43148 476 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 TNFRSF21O75509 655 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CLPXO76031 633 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PRKCBP05771 671 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CES1P23141 567 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 WEE1P30291 646 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CLK1P49759 484 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 NDST2P52849 883 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 KRR1Q13601 381 aaKnown RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PTK6Q13882 451 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CCNIQ14094 377 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ABCB5Q2M3G0 1257 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 MTX3Q5HYI7 312 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 KCTD8Q6ZWB6 473 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 IRF2BP2Q7Z5L9 587 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 MICU2Q8IYU8 434 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ESX1Q8N693 406 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 NLRP4Q96MN2 994 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 COQ10BQ9H8M1 238 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 TUFT1Q9NNX1 390 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ACP6Q9NPH0 428 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 TLL2Q9Y6L7 1015 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 AGRPO00253 132 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 TGDSO95455 350 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 NR3C1P04150 777 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PFKFB3Q16875 520 aaPredicted RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 DCAF12L1Q5VU92 463 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 BSPRYQ5W0U4 402 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SULT1C3Q6IMI6 304 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 LAYNQ6UX15 382 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 BNIPLQ7Z465 357 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 TICAM1Q8IUC6 712 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ARMC8Q8IUR7 673 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 CADM3Q8N126 398 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 FBXO36Q8NEA4 188 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 OR7A2PQ8NGA2 310 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 BBS2Q9BXC9 721 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 RHOBTB2Q9BYZ6 727 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 C6orf62Q9GZU0 229 aaPredicted RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ATP13A3Q9H7F0 1226 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 EMC3Q9P0I2 261 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PCDH10Q9P2E7 1040 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PLA2G4CQ9UP65 541 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 KLHL20Q9Y2M5 609 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PSTPIP1O43586 416 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ALBP02768 609 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SOX11P35716 441 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 LAMC2Q13753 1193 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 HERC3Q15034 1050 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SMAD1Q15797 465 aaKnown RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PXDC1Q5TGL8 231 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SNX32Q86XE0 403 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SNX29P2Q8IUI4 249 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 LZTR1Q8N653 840 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 HM13Q8TCT9 377 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SLC7A3Q8WY07 619 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 DLG3Q92796 817 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 MARK4Q96L34 752 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF512Q96ME7 567 aaPredicted RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 SLC35C2Q9NQQ7 365 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF224Q9NZL3 707 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ANKMY1Q9P2S6 941 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 FBXO40Q9UH90 709 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PCDHA12Q9UN75 941 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 PCDHGA11Q9Y5H2 935 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 CPQQ9Y646 472 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 A0A088AWK7 358 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 ARHGEF35A5YM69 484 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 KRT87PA6NCN2 255 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 A8MV72 311 aaPredicted RBP7.59□□□□□ -1.19
PDE6A-205ENST00000617647 WDR64B1ANS9 1081 aa7.59□□□□□ -1.19
PDE6A-205ENST00000617647 BANF1O75531 89 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms