RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 RIC8BQ9NVN3 520 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 ZNF214Q9UL59 606 aaPredicted RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 PTCH2Q9Y6C5 1203 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 TRPC5OSA6NMA1 111 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 NPY2RP49146 381 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SETD3Q86TU7 594 aaPredicted RBP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 PGBD3Q8N328 593 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 PPP1R13LQ8WUF5 828 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 MRPL1Q9BYD6 325 aaKnown RBP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SERPINF2P08697 491 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 OR1E1P30953 314 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SNX31Q8N9S9 440 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ERBB2P04626 1255 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 TMC3Q7Z5M5 1100 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 APOL2Q9BQE5 337 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 IPPQ9Y573 584 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 FGF10O15520 208 aaPredicted RBP12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ITGALP20701 1170 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 DPF3Q92784 378 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 SEMA4AQ9H3S1 761 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 GGT7Q9UJ14 662 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 ITM2BQ9Y287 266 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
CYFIP1-207ENST00000617556 LAMB4A4D0S4 1761 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 UNCXA6NJT0 531 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 SEC24CP53992 1094 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 CREMQ03060 361 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ENPEPQ07075 957 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 MPP3Q13368 585 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 SPDYAQ5MJ70 313 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 HELQQ8TDG4 1101 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 RNF103O00237 685 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 CALCAP01258 141 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PGAM1P18669 254 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 APOL5Q9BWW9 433 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 TM9SF1O15321 606 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 KDM1AO60341 852 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 GLP2RO95838 553 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 TRUB2O95900 331 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 KRT16P08779 473 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 FAR2Q96K12 515 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ILKAPQ9H0C8 392 aaPredicted RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 XYLBO75191 536 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ELK3P41970 407 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PSEN1P49768 467 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 DNAJC3Q13217 504 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PABPC1LQ4VXU2 614 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ANKS3Q6ZW76 656 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 POLNQ7Z5Q5 900 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PIGZQ86VD9 579 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PCYOX1LQ8NBM8 494 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 AENQ8WTP8 325 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 LPPQ93052 612 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 RUVBL2Q9Y230 463 aaKnown RBP12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 POU4F1Q01851 419 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 TTC30BQ8N4P2 665 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 TMEM199Q8N511 208 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ATP13A1Q9HD20 1204 aa12.6□□□□□ -0.39
CYFIP1-207ENST00000617556 ARHGAP10A1A4S6 786 aa12.59□□□□□ -0.39
CYFIP1-207ENST00000617556 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
CYFIP1-207ENST00000617556 SCNN1BP51168 640 aa12.59□□□□□ -0.39
CYFIP1-207ENST00000617556 C15orf59Q2T9L4 293 aaPredicted RBP12.59□□□□□ -0.39
CYFIP1-207ENST00000617556 LGI2Q8N0V4 545 aa12.59□□□□□ -0.39
CYFIP1-207ENST00000617556 RNF217Q8TC41 542 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms