RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 TSPAN1O60635 241 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 FGF18O76093 207 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 DDHD2O94830 711 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 STAG3L1P0CL83 205 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 MYBP10242 640 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 TMOD1P28289 359 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 ARL2P36404 184 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 NRIP1P48552 1158 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 MBTD1Q05BQ5 628 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 TWF2Q6IBS0 349 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 FAM173BQ6P4H8 233 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 USP30Q70CQ3 517 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 CATSPER4Q7RTX7 472 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 ZNF280BQ86YH2 543 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 GPR135Q8IZ08 494 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 SLC39A11Q8N1S5 342 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 NEK9Q8TD19 979 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 PSPC1Q8WXF1 523 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 TNPO1Q92973 898 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 ZSCAN31Q96LW9 406 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 MMTAG2Q9BU76 263 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 APOL6Q9BWW8 343 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 FOXP1Q9H334 677 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 NXF3Q9H4D5 531 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 EPHX3Q9H6B9 360 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 C1orf112Q9NSG2 853 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 MIOSQ9NXC5 875 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 NPFFR2Q9Y5X5 522 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 A0A0U1RQF3 1178 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 B2RBV5 119 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 SMAD7O15105 426 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 ZC3H11AO75152 810 aaKnown RBP eCLIP5.05□□□□□ -1.6
CUL3-216ENST00000617432 OFD1O75665 1012 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 LYPLA2O95372 231 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 BAG4O95429 457 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 NPTXRO95502 500 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 POMCP01189 267 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 LTFP02788 710 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 RPLP2P05387 115 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 COL6A2P12110 1019 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 ZSCAN20P17040 1043 aaPredicted RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 ARF4P18085 180 aaPredicted RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 SFPQP23246 707 aaKnown RBP eCLIP5.05□□□□□ -1.6
CUL3-216ENST00000617432 SP100P23497 879 aaPredicted RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 AKAP5P24588 427 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 U2AF2P26368 475 aaKnown RBP eCLIP5.05□□□□□ -1.62e-7■■■□□ 15.3
CUL3-216ENST00000617432 MLH1P40692 756 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 SLC11A1P49279 550 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 BCAR1P56945 870 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 HMGN5P82970 282 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 GNL2Q13823 731 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 SAFBQ15424 915 aaKnown RBP eCLIP5.05□□□□□ -1.6
CUL3-216ENST00000617432 PTPROQ16827 1216 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 LEXMQ3ZCV2 418 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 SLC35F1Q5T1Q4 408 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 MICALCLQ6ZW33 695 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 ZNF410Q86VK4 478 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 THNSL1Q8IYQ7 743 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 LRRC43Q8N309 656 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 KCTD13Q8WZ19 329 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 C1orf159Q96HA4 380 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 B3GALT6Q96L58 329 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 NAP1L4Q99733 375 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 ZDHHC5Q9C0B5 715 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 TMEM117Q9H0C3 514 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 ELAC1Q9H777 363 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 GPR27Q9NS67 375 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 DDX19AQ9NUU7 478 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 TBC1D13Q9NVG8 400 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 MARCH5Q9NX47 278 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 PPARGC1AQ9UBK2 798 aaKnown RBP5.05□□□□□ -1.6
CUL3-216ENST00000617432 IPPQ9Y573 584 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 PCDHB2Q9Y5E7 798 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 MYO7AQ13402 2215 aa5.05□□□□□ -1.6
CUL3-216ENST00000617432 PMS2P1A4D2B8 440 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 LRRIQ4A6NIV6 560 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 AGRPO00253 132 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 MBTPS2O43462 519 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 SSBP05455 408 aaKnown RBP eCLIP5.04□□□□□ -1.6
CUL3-216ENST00000617432 RB1P06400 928 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 WEE2P0C1S8 567 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 LAG3P18627 525 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 CA8P35219 290 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 CCT6AP40227 531 aaKnown RBP5.04□□□□□ -1.6
CUL3-216ENST00000617432 DNM2P50570 870 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 SCNN1GP51170 649 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 PTENP60484 403 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 MAPK7Q13164 816 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 ZRSR1Q15695 479 aaKnown RBP5.04□□□□□ -1.6
CUL3-216ENST00000617432 SPECC1Q5M775 1068 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 TAS1R1Q7RTX1 841 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 DAW1Q8N136 415 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 MRPS27Q92552 414 aaKnown RBP5.04□□□□□ -1.6
CUL3-216ENST00000617432 P2RX5Q93086 422 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 PABPC5Q96DU9 382 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms