RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CRCPO75575 148 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 KLHL2O95198 593 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRUB2O95900 331 aaKnown RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC4A1P02730 911 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SH3D19Q5HYK7 790 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 N4BP2L1Q5TBK1 243 aaPredicted RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAM183BPQ6ZVS7 135 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNF135Q8IUD6 432 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC44A1Q8WWI5 657 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 KCNK16Q96T55 309 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 PCYT2Q99447 389 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SAR1AQ9NR31 198 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 C20orf96Q9NUD7 363 aaPredicted RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADAMTS7Q9UKP4 1686 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 A0A096LPK6 155 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 LOC102724159A0A0B4J2E5 919 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 PDHXO00330 501 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 TIMM44O43615 452 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 APOEP02649 317 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 KCNA4P22459 653 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 POLE2P56282 527 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 MRPS35P82673 323 aaKnown RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 PWP2Q15269 919 aaKnown RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SH3PXD2AQ5TCZ1 1133 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 GLB1LQ6UWU2 654 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 XYLT1Q86Y38 959 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 MIB1Q86YT6 1006 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 CCDC117Q8IWD4 279 aaPredicted RBP5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADGRF2Q8IZF7 708 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SENP8Q96LD8 212 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZFP42Q96MM3 310 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 SERPINI1Q99574 410 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 GOLGA2P5Q9HBQ8 144 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 DLGAP2Q9P1A6 1054 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 HMGXB4Q9UGU5 601 aa5.81□□□□□ -1.48
SYNCRIP-204ENST00000616122 AFDNP55196 1824 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 RGPD5Q99666 1765 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ALADP13716 330 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 DARSP14868 501 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 NOS2P35228 1153 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GRM5P41594 1212 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 PPIL2Q13356 520 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TTC7BQ86TV6 843 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CMTM5Q96DZ9 223 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 P2RY11Q96G91 374 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CELF6Q96J87 481 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 SPATS2LQ9NUQ6 558 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ETNK2Q9NVF9 386 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GTSE1Q9NYZ3 720 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CNTN6Q9UQ52 1028 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 COL14A1Q05707 1796 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CLUHO75153 1309 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRDMT1O14717 391 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 AIM2O14862 343 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CHADO15335 359 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 LTFP02788 710 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 THP07101 528 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TSHRP16473 764 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GOT1P17174 413 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TPH1P17752 444 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 MATKP42679 507 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 COPAP53621 1224 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CUL3Q13618 768 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 SPOUT1Q5T280 376 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 WSCD1Q658N2 575 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 RNF43Q68DV7 783 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 IQSEC1Q6DN90 963 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 KIAA1841Q6NSI8 718 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACAD11Q709F0 780 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRPF39Q86UA1 669 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CSPG4P5Q96PW8 444 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ILKAPQ9H0C8 392 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATXN3LQ9H3M9 355 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 WDCPQ9H6R7 721 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 PABPN1LA6NDY0 278 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ERBB2P04626 1255 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GLRBP48167 497 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADGRD1Q6QNK2 874 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 RASSF3Q86WH2 238 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 SHCBP1Q8NEM2 672 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 C18orf25Q96B23 403 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TXLNGYQ9BZA5 131 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAF1Q9H063 256 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 PFDN4Q9NQP4 134 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 THAP1Q9NVV9 213 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 NCAM2O15394 837 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRPA1O75762 1119 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 STBD1O95210 358 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATG7O95352 703 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 SERPINE1P05121 402 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 MGAT1P26572 445 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 MED21Q13503 144 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ACVR2BQ13705 512 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 STRA8Q7Z7C7 330 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 EXT2Q93063 718 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 EFHD1Q9BUP0 239 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms