RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PIP4P1Q86T03 277 aa21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 NDRG1Q92597 394 aaKnown RBP21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 FAM124BQ9H5Z6 455 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 THAP10Q9P2Z0 257 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 STRIP2Q9ULQ0 834 aa21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 CLEC4EQ9ULY5 219 aa21.77■■□□□ 1.08
TRAPPC3-208ENST00000616074 CKAP5Q14008 2032 aa21.77■■□□□ 1.07
TRAPPC3-208ENST00000616074 NDUFS2O75306 463 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 PRCPP42785 496 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 SLC8A3P57103 927 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 STARD3Q14849 445 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 CACNA1EQ15878 2313 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 TCERG1LQ5VWI1 586 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 BHLHA9Q7RTU4 235 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 HDDC3Q8N4P3 179 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 OR2I1PQ8NGU4 316 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZNF419Q96HQ0 510 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 PIWIL1Q96J94 861 aaKnown RBP21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 ADAM33Q9BZ11 813 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 ULBP1Q9BZM6 244 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
TRAPPC3-208ENST00000616074 UPK3BL1B0FP48 263 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 UPK3BL2E5RIL1 263 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ARHGAP33O14559 1287 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZZEF1O43149 2961 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZBED1O96006 694 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 PDE4CQ08493 712 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 CUL2Q13617 745 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ENPP2Q13822 863 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 PM20D1Q6GTS8 502 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ANKS1BQ7Z6G8 1248 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZC3H3Q8IXZ2 948 aaKnown RBP21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 RGL4Q8IZJ4 473 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 CPXM2Q8N436 756 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 MINDY1Q8N5J2 469 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 PLD4Q96BZ4 506 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 CCDC34Q96HJ3 373 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 SCNM1Q9BWG6 230 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 TMEM121BQ9BXQ6 578 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 MKRN2Q9H000 416 aaKnown RBP21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 PRDM16Q9HAZ2 1276 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 COQ4Q9Y3A0 265 aa21.75■■□□□ 1.07
TRAPPC3-208ENST00000616074 IGF2RP11717 2491 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 SPAARA0A1B0GVQ0 90 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 XPO1O14980 1071 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 NPC1O15118 1278 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 SLC16A3O15427 465 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 OPHN1O60890 802 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 CYBBP04839 570 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 CD6P30203 668 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 PMS1P54277 932 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 BCAT1P54687 386 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZNF658Q5TYW1 1059 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 METTL3Q86U44 580 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 FAM217AQ8IXS0 508 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 DDI1Q8WTU0 396 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 UCMAQ8WVF2 138 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 RMND1Q9NWS8 449 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 USP36Q9P275 1121 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 SPEGQ15772 3267 aa21.74■■□□□ 1.07
TRAPPC3-208ENST00000616074 ADIGQ0VDE8 80 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 BST2Q10589 180 aaKnown RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZNF234Q14588 700 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 TRIP4Q15650 581 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 COBLL1Q53SF7 1204 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 SGO2Q562F6 1265 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 ANKRD40Q6AI12 368 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 FMNL3Q8IVF7 1028 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 FMR1NBQ8N0W7 255 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 RBBP8NLQ8NC74 664 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 FOXJ1Q92949 421 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 TOE1Q96GM8 510 aaKnown RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 TSG101Q99816 390 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 ELOVL2Q9NXB9 296 aa21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 WSB2Q9NYS7 404 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC3-208ENST00000616074 MUC22E2RYF6 1773 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 TRIM49BA6NDI0 452 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 KCNJ18B7U540 433 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SYPP08247 313 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 CD19P15391 556 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 MAOBP27338 520 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZNF132P52740 706 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SIM1P81133 766 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 FKBP3Q00688 224 aaKnown RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 EIF4HQ15056 248 aaKnown RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 PLEKHG6Q3KR16 790 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SYCP2LQ5T4T6 812 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 TMEM215Q68D42 235 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 UBR7Q8N806 425 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SORCS1Q8WY21 1168 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 ERCC4Q92889 916 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 CIPCQ9C0C6 399 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 LRRC4Q9HBW1 653 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 ITM2CQ9NQX7 267 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 OLA1Q9NTK5 396 aaKnown RBP21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 HESX1Q9UBX0 185 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SUSD2Q9UGT4 822 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 SFMBT1Q9UHJ3 866 aa21.72■■□□□ 1.07
TRAPPC3-208ENST00000616074 HYAL3O43820 417 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 SYNCRIPO60506 623 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms