RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LHX5Q9H2C1 402 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 IKZF4Q9H2S9 585 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 THSD1Q9NS62 852 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 WDR35Q9P2L0 1181 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 CLEC4EQ9ULY5 219 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SLC27A6Q9Y2P4 619 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 SNX9Q9Y5X1 595 aa7.27□□□□□ -1.25
MUC1-227ENST00000615517 A0A1W2PPC4 97 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 C10orf142B7Z368 130 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 NPC1O15118 1278 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 YKT6O15498 198 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 OPA1O60313 960 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 PDGFRBP09619 1106 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 ZDHHC11BP0C7U3 371 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 YWHAQP27348 245 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 RXRGP48443 463 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 FOXK1P85037 733 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SRSF6Q13247 344 aaKnown RBP7.26□□□□□ -1.25
MUC1-227ENST00000615517 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
MUC1-227ENST00000615517 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 ARSHQ5FYA8 562 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 MDH1BQ5I0G3 518 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 TMEM215Q68D42 235 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 KIAA0895LQ68EN5 471 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 XKR5Q6UX68 686 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SKAP1Q86WV1 359 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
MUC1-227ENST00000615517 FAM26EQ8N5C1 309 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SCAMP5Q8TAC9 235 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 MYCBPAPQ8TBZ2 947 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 FBXO32Q969P5 355 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 PIWIL1Q96J94 861 aaKnown RBP7.26□□□□□ -1.25
MUC1-227ENST00000615517 SLC46A1Q96NT5 459 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 KLF16Q9BXK1 252 aaPredicted RBP7.26□□□□□ -1.25
MUC1-227ENST00000615517 EPN3Q9H201 632 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SIX4Q9UIU6 781 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 CDH9Q9ULB4 789 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 SATB2Q9UPW6 733 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 HIVEP3Q5T1R4 2406 aa7.26□□□□□ -1.25
MUC1-227ENST00000615517 CDRT15L2A8MXV6 281 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 CLDN5O00501 218 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 PFKFB2O60825 505 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 TBX18O95935 607 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 PENKP01210 267 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 PRKCSHP14314 528 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 CD38P28907 300 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 TUBP50607 506 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 SLC12A3P55017 1021 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 NXPH1P58417 271 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 RPS14P62263 151 aaKnown RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 IL17AQ16552 155 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 C3orf38Q5JPI3 329 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 FYB2Q5VWT5 728 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 ADALQ6DHV7 355 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 Q6ZNB5 142 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 NUP93Q8N1F7 819 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 CSGALNACT2Q8N6G5 542 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 LRRC52Q8N7C0 313 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 ZNF366Q8N895 744 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 PDZD8Q8NEN9 1154 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 OVCA2Q8WZ82 227 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 LIN37Q96GY3 246 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 DEPDC7Q96QD5 511 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 CCNL2Q96S94 520 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 FIZ1Q96SL8 496 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 ARHGAP9Q9BRR9 750 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 ZNF518BQ9C0D4 1074 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 CAAP1Q9H8G2 361 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 GDF3Q9NR23 364 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 ELOVL2Q9NXB9 296 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 IL37Q9NZH6 218 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 PLEKHB1Q9UF11 243 aaPredicted RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 AGO2Q9UKV8 859 aaKnown RBP7.25□□□□□ -1.25
MUC1-227ENST00000615517 STYXL1Q9Y6J8 313 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 UNC13CQ8NB66 2214 aa7.25□□□□□ -1.25
MUC1-227ENST00000615517 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 ESPL1Q14674 2120 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 A0A1B0GVM2 712 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 H0YCG3 227 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 K7ENM7 598 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 LZTS3O60299 673 aaPredicted RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 SDC3O75056 442 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 CDC45O75419 566 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 ITGB2P05107 769 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 ARRB1P49407 418 aaPredicted RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 GALCP54803 685 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 ASIC1P78348 528 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 TFAMQ00059 246 aaKnown RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 POU5F1Q01860 360 aaKnown RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 KCNJ12Q14500 433 aa7.24□□□□□ -1.25
MUC1-227ENST00000615517 MAPRE1Q15691 268 aaKnown RBP7.24□□□□□ -1.25
MUC1-227ENST00000615517 SKIDA1Q1XH10 827 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms