RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DHX38Q92620 1227 aaKnown RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 ZFRQ96KR1 1074 aaKnown RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 NT5C1BQ96P26 610 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 ZNF148Q9UQR1 794 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 ENO1P06733 434 aaKnown RBP22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 EFHC1Q5JVL4 640 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 LIN9Q5TKA1 542 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 UGT2A3Q6UWM9 527 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 SATL1Q86VE3 508 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 PASD1Q8IV76 773 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 PYROXD1Q8WU10 500 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 NLRP7Q8WX94 980 aa22.68■■□□□ 1.22
POLR2J3-220ENST00000613744 A0A087WZ62 844 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 I3L4J1 428 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 CASQ2O14958 399 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 ITGAVP06756 1048 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 PTPN7P35236 360 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 THPOP40225 353 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 TLE2Q04725 743 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 PDK3Q15120 406 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 PPP1R2P3Q6NXS1 205 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 TREML1Q86YW5 311 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 RAB3IL1Q8TBN0 382 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 SPIRE2Q8WWL2 714 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 NKD2Q969F2 451 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 FDXACB1Q9BRP7 624 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 MRPL47Q9HD33 250 aaKnown RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 E7ESA3 106 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 CCNT2O60583 730 aaKnown RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 DEUP1Q05D60 604 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 NFX1Q12986 1120 aaKnown RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 MXD4Q14582 209 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 KRT39Q6A163 491 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 TAF2Q6P1X5 1199 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 TNS4Q8IZW8 715 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 NTPCRQ9BSD7 190 aaKnown RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 CCDC106Q9BWC9 280 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 ACP6Q9NPH0 428 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 ARMCX1Q9P291 453 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 DNPEPQ9ULA0 475 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 SOX13Q9UN79 622 aa22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 FARP1Q9Y4F1 1045 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-220ENST00000613744 A0A0J9YVX5 310 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 BGNP21810 368 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 NAMPTP43490 491 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 VCPP55072 806 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 GTF2BQ00403 316 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 MSLNQ13421 630 aaPredicted RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 SFT2D3Q587I9 215 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 ATG16L1Q676U5 607 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 ALYREFQ86V81 257 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 NMD3Q96D46 503 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 VCPIP1Q96JH7 1222 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 HSPBP1Q9NZL4 362 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 TISP43B9A030 160 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 CPA2P48052 419 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 PTK7Q13308 1070 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 MTA1Q13330 715 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 TFDP1Q14186 410 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 MMEL1Q495T6 779 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 BORAQ6PGQ7 559 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 RFX8Q6ZV50 586 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 MARVELD2Q8N4S9 558 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 MRRFQ96E11 262 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 CYTH2Q99418 400 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 OSMRQ99650 979 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 SIKE1Q9BRV8 207 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 TMEM8AQ9HCN3 771 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 PPARGC1AQ9UBK2 798 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 TBX20Q9UMR3 447 aa22.66■■□□□ 1.22
POLR2J3-220ENST00000613744 FAM237BA0A1B0GVD1 139 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 VILLO15195 856 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 GPR32O75388 356 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 USP1O94782 785 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 CD4P01730 458 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 SERPINA6P08185 405 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 SMIM18P0DKX4 95 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 GTF2H1P32780 548 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 TAS2R40P59535 323 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 OASLQ15646 514 aaKnown RBP22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 PPIL6Q8IXY8 311 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 GLIS1Q8NBF1 620 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 PLEKHO2Q8TD55 490 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 APBB2Q92870 758 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 FAM118BQ9BPY3 351 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 ST6GALNAC4Q9H4F1 302 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 MINDY3Q9H8M7 445 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 TBCCD1Q9NVR7 557 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 RAB20Q9NX57 234 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 CLIC5Q9NZA1 410 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 THEGQ9P2T0 379 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 DMTF1Q9Y222 760 aa22.65■■□□□ 1.22
POLR2J3-220ENST00000613744 A0A088AWK7 358 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 ARHGAP10A1A4S6 786 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 DENRO43583 198 aaKnown RBP22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 ATP6V1G1O75348 118 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 AOC1P19801 751 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 NOP14P78316 857 aaKnown RBP22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 ADRM1Q16186 407 aa22.64■■□□□ 1.22
POLR2J3-220ENST00000613744 C1orf228Q6PIY5 440 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms