RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 IFNAR1P17181 557 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CSNK2BP67870 215 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CLVS2Q5SYC1 327 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TEX47Q8TBZ9 253 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 AP3S1Q92572 193 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ZHX1-C8orf76Q96EF9 292 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 EML1O00423 815 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GCNT3O95395 438 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TGDSO95455 350 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 RPS17P08708 135 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ITGA8P53708 1063 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ZC3H12BQ5HYM0 836 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DCDC5Q6ZRR9 648 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 UNC5CLQ8IV45 518 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TCF7L2Q9NQB0 619 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MARCOQ9UEW3 520 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MEGF6O75095 1541 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 POU1F1P28069 291 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 E2F2Q14209 437 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PDK4Q16654 411 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DGKDQ16760 1214 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CCNYL2Q5T2Q4 361 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NT5DC1Q5TFE4 455 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ITIH5Q86UX2 942 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TICAM1Q8IUC6 712 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLFN12Q8IYM2 578 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MYD88Q99836 296 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ZMYM5Q9UJ78 669 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 B4E1Z4 1266 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 HAT1O14929 419 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 HLA-DRAP01903 254 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CHRNB3Q05901 458 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 AUHQ13825 339 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 C7orf26Q96N11 449 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 RNF26Q9BY78 433 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DUSP10Q9Y6W6 482 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 STK36Q9NRP7 1315 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 HEATR9A2RTY3 570 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 EFCAB10A6NFE3 127 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 C12orf71A8MTZ7 269 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NPR2P20594 1047 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PSMB9P28065 219 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CDC25AP30304 524 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SOX5P35711 763 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ARSEP51690 589 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CDKAL1Q5VV42 579 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ARHGAP17Q68EM7 881 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 OR8K3Q8NH51 312 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 EEF2KMTQ96G04 330 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ELMO2Q96JJ3 720 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CCSER1Q9C0I3 900 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 RAD54BQ9Y620 910 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SSNA1O43805 119 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 RGS7P49802 495 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DENND5AQ6IQ26 1287 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ANKRD13DQ6ZTN6 518 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CARNMT1Q8N4J0 409 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 BRD9Q9H8M2 597 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SH3GLB2Q9NR46 395 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 A8MUI8 341 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NUAK1O60285 661 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ICMTO60725 284 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TGM6O95932 706 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PEPDP12955 493 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MYL7Q01449 175 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 IRF5Q13568 498 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GALNTL6Q49A17 601 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 BLIDQ8IZY5 108 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ANGPTL6Q8NI99 470 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DNAJC1Q96KC8 554 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PPA2Q9H2U2 334 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PRDM5Q9NQX1 630 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.08□□□□□ -1.64e-7■■□□□ 13.1
VPS13D-213ENST00000613099 ABCB11O95342 1321 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLC22A1O15245 554 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 UPP2O95045 317 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PON1P27169 355 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 LRP8Q14114 963 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 AARS2Q5JTZ9 985 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 AGAP9Q5VTM2 703 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PLET1Q6UQ28 207 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 FASTKD5Q7L8L6 764 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SLC9A6Q92581 669 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 EYA3Q99504 573 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SENP7Q9BQF6 1050 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SAV1Q9H4B6 383 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 WDR6Q9NNW5 1121 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 EXOSC4Q9NPD3 245 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 KLHL1Q9NR64 748 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 UFSP2Q9NUQ7 469 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RXRAP19793 462 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TYK2P29597 1187 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 BNIP2Q12982 314 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SH3BP5LQ7L8J4 393 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 C8orf59Q8N0T1 100 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GUF1Q8N442 669 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CCNYL1Q8N7R7 359 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ERMAPQ96PL5 475 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms