RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TLE6Q9H808 572 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 ZNF180Q9UJW8 692 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 TRIM17Q9Y577 477 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 GOLGA8RI6L899 631 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 APOL1O14791 398 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 MDM4O15151 490 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 GPR182O15218 404 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 CD4P01730 458 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 YWHAZP63104 245 aaKnown RBP15.22■□□□□ 0.03
CDH1-213ENST00000612417 MGAT3Q09327 533 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 MTM1Q13496 603 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 C4orf22Q6V702 233 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 CLNKQ7Z7G1 428 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 HACE1Q8IYU2 909 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 APBB2Q92870 758 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 SERAC1Q96JX3 654 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 ZNF670Q9BS34 389 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 SLC4A5Q9BY07 1137 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 CXorf56Q9H5V9 222 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 PCDH18Q9HCL0 1135 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 RAB6BQ9NRW1 208 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 TTLL3Q9Y4R7 772 aa15.22■□□□□ 0.03
CDH1-213ENST00000612417 KCNE1P15382 129 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 YWHAGP61981 247 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDH1-213ENST00000612417 FAAP100Q0VG06 881 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TAF1BQ53T94 588 aaPredicted RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 C9orf57Q5W0N0 161 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TMEM110Q86TL2 294 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 SLC26A11Q86WA9 606 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 ARRDC4Q8NCT1 418 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 N4BP2L2Q92802 583 aaPredicted RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 LRRC39Q96DD0 335 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TSSK1BQ9BXA7 367 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 POPDC2Q9HBU9 364 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 CHST12Q9NRB3 414 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 MOXD2PA6NHM9 499 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TRDMT1O14717 391 aaKnown RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 KLF11O14901 512 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 KCNN4O15554 427 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 GSTA2P09210 222 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 PRKCHP24723 683 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 CD52P31358 61 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 BCAR1P56945 870 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 PRKD1Q15139 912 aaPredicted RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 CDO1Q16878 200 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 GOLGA7BQ2TAP0 167 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 TTC39BQ5VTQ0 682 aaPredicted RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 MCUQ8NE86 351 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 PCDH19Q8TAB3 1148 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 RSRC1Q96IZ7 334 aaKnown RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 KLF6Q99612 283 aaPredicted RBP15.21■□□□□ 0.03
CDH1-213ENST00000612417 TBC1D10AQ9BXI6 508 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 KLC2Q9H0B6 622 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 PADI3Q9ULW8 664 aa15.21■□□□□ 0.03
CDH1-213ENST00000612417 WDR91A4D1P6 747 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 DNAJC6O75061 913 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 ZBED1O96006 694 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 PTPN4P29074 926 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SDC4P31431 198 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 MAGEA3P43357 314 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 PRMT2P55345 433 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SLC6A3Q01959 620 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 LHX8Q68G74 356 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 PMF1Q6P1K2 205 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 LRRC6Q86X45 466 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 ZDHHC17Q8IUH5 632 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 C12orf29Q8N999 325 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 RFWD2Q8NHY2 731 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 STK32AQ8WU08 396 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 FAM172AQ8WUF8 416 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDH1-213ENST00000612417 ZFP42Q96MM3 310 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 ANKRD27Q96NW4 1050 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 TSPAN18Q96SJ8 248 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 TSEN34Q9BSV6 310 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 SNRNP25Q9BV90 132 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 C12orf65Q9H3J6 166 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 GOLGA2P5Q9HBQ8 144 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 MKS1Q9NXB0 559 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SAGE1Q9NXZ1 904 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 AVILO75366 819 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 GRAP2O75791 330 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 CBX6O95503 412 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 MYCP01106 439 aaPredicted RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 DESP17661 470 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 RBL1P28749 1068 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SLC8A3P57103 927 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms