RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 HDXQ7Z353 690 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 HERVK_113Q902F9 699 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 CLP1Q92989 425 aaKnown RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 CAVIN3Q969G5 261 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 SMOC2Q9H3U7 446 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 STK39Q9UEW8 545 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 MCF2LO15068 1137 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 IRAK2O43187 625 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 FGF18O76093 207 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ARL4AP40617 200 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 TAF10Q12962 218 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 NNTQ13423 1086 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 AUTS2Q8WXX7 1259 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 P3H4Q92791 437 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 CASP10Q92851 521 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 RAD9AQ99638 391 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 TMEM121Q9BTD3 319 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 TKTL2Q9H0I9 626 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 HSFX1Q9UBD0 423 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ASIC3Q9UHC3 531 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 SLC38A8A6NNN8 435 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 MAP2K7O14733 419 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 SEC24AO95486 1093 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 KRT14P02533 472 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ATF2P15336 505 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ZFXP17010 805 aaPredicted RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 DNAJB2P25686 324 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 KLRC2P26717 231 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 PSEN1P49768 467 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 EIF3EP60228 445 aaKnown RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 RAB33AQ14088 237 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 CASP8Q14790 479 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ZDHHC24Q6UX98 284 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 GPR65Q8IYL9 337 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 CCDC89Q8N998 374 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 PHOSPHO2Q8TCD6 241 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 RNF34Q969K3 372 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ZDHHC18Q9NUE0 388 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 CLIC5Q9NZA1 410 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 SFMBT1Q9UHJ3 866 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 NUDT5Q9UKK9 219 aa12.76□□□□□ -0.37
CBWD1-220ENST00000612045 ZMYND8Q9ULU4 1186 aaPredicted RBP12.76□□□□□ -0.37
CBWD1-220ENST00000612045 H3BRJ5 948 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 CREB3O43889 395 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 TLL1O43897 1013 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 LILRB3O75022 631 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 RBP3P10745 1247 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 ATP2A2P16615 1042 aaKnown RBP12.75□□□□□ -0.37
CBWD1-220ENST00000612045 AMPD1P23109 780 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 IVDP26440 423 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 PLTPP55058 493 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 MSANTD2Q6P1R3 559 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 HTATIP2Q9BUP3 242 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 TTLL2Q9BWV7 592 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 PRDM16Q9HAZ2 1276 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 ARHGEF4Q9NR80 690 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
CBWD1-220ENST00000612045 ARHGEF38Q9NXL2 777 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 WHRNQ9P202 907 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 FNIP2Q9P278 1114 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
CBWD1-220ENST00000612045 FAM72CH0Y354 149 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 SGK1O00141 431 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
CBWD1-220ENST00000612045 MSI1O43347 362 aaKnown RBP12.74□□□□□ -0.37
CBWD1-220ENST00000612045 RARGP13631 454 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 CCR1P32246 355 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 ADCY8P40145 1251 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 NR2C2P49116 596 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 VPS41P49754 854 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 CALCOCO2Q13137 446 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 DPYSQ14117 519 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 BRMS1LQ5PSV4 323 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 FAM72AQ5TYM5 149 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 FAM72DQ6L9T8 149 aa12.74□□□□□ -0.37
CBWD1-220ENST00000612045 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms