RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 NKX1-2Q9UD57 310 aaPredicted RBP8.31□□□□□ -1.08
HCG18-248ENST00000602861 SLC24A2Q9UI40 661 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 MSRAQ9UJ68 235 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 DNPEPQ9ULA0 475 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 PHTF1Q9UMS5 762 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 STK38LQ9Y2H1 464 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 PCDHB4Q9Y5E5 795 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.31□□□□□ -1.08
HCG18-248ENST00000602861 SCINQ9Y6U3 715 aa8.31□□□□□ -1.08
HCG18-248ENST00000602861 CLUHO75153 1309 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 LRRC37A2A6NM11 1700 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 hCG_1818297A0A087WSY0 165 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 TRAFD1O14545 582 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 DYNC1LI2O43237 492 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 SMNDC1O75940 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
HCG18-248ENST00000602861 CD4P01730 458 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 KRT1P04264 644 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ZSCAN5DPP0CG00 497 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 HOXD8P13378 290 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 KRT10P13645 584 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ACPPP15309 386 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PAX7P23759 505 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 GJC1P36383 396 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PIK3CAP42336 1068 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 NRLP54845 237 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 VCPP55072 806 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 CCL23P55773 120 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 NLRP11P59045 1033 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 GPX6P59796 221 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 RPS6P62753 249 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 NKX3-2P78367 333 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ATP11AP98196 1134 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 OGDHQ02218 1023 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 DNAJC3Q13217 504 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ITGA7Q13683 1181 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 BLMHQ13867 455 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 MORF4L2Q15014 288 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CCDC85BQ15834 202 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 ANKRD20A2Q5SQ80 823 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 WASHC2DQ5SRD0 308 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ANKRD20A1Q5TYW2 823 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ANKRD20A3Q5VUR7 823 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CDCA2Q69YH5 1023 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 XRRA1Q6P2D8 792 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 OTOAQ7RTW8 1153 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PASD1Q8IV76 773 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 FAM13CQ8NE31 585 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 MCPH1Q8NEM0 835 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 MZB1Q8WU39 189 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 HERVK_113Q902F9 699 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 GPRASP2Q96D09 838 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CEP170P1Q96L14 293 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CNTNAP3BQ96NU0 1288 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CGRRF1Q99675 332 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 MAK16Q9BXY0 300 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 CNTNAP3Q9BZ76 1288 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 TRPV6Q9H1D0 765 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 POLR3FQ9H1D9 316 aaPredicted RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 NKX2-4Q9H2Z4 354 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 RNPEPL1Q9HAU8 725 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PCDH9Q9HC56 1237 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 SLCO1B3Q9NPD5 702 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PDGFCQ9NRA1 345 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 KLHL11Q9NVR0 708 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CYP39A1Q9NYL5 469 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 THEGQ9P2T0 379 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 GABBR1Q9UBS5 961 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 IP6K2Q9UHH9 426 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 RPL26L1Q9UNX3 145 aaKnown RBP8.3□□□□□ -1.08
HCG18-248ENST00000602861 SHOC2Q9UQ13 582 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 TELO2Q9Y4R8 837 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 PCDHA10Q9Y5I2 948 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
HCG18-248ENST00000602861 CNTNAP2Q9UHC6 1331 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 LAMA2P24043 3122 aaKnown RBP8.29□□□□□ -1.08
HCG18-248ENST00000602861 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
HCG18-248ENST00000602861 A0A1W2PPM1 405 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 GSTTP1A0A1W2PQM5 241 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 CCDC189A1A4V9 331 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 C3orf70A6NLC5 250 aaPredicted RBP8.29□□□□□ -1.08
HCG18-248ENST00000602861 E7ENQ6 273 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 E7ESA3 106 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 POC1B-GALNT4F8VUJ3 575 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 H0YCG3 227 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 C2CD2LO14523 706 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
HCG18-248ENST00000602861 B4GALT4O60513 344 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 DCTN3O75935 186 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 FGBP02675 491 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 ITGAVP06756 1048 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 KCNA2P16389 499 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
HCG18-248ENST00000602861 GM2AP17900 193 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 CALB2P22676 271 aa8.29□□□□□ -1.08
HCG18-248ENST00000602861 MMP8P22894 467 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms